DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and GAE6

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_189024.1 Gene:GAE6 / 821965 AraportID:AT3G23820 Length:460 Species:Arabidopsis thaliana


Alignment Length:373 Identity:79/373 - (21%)
Similarity:136/373 - (36%) Gaps:103/373 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLVTGGTGLVGKALEAVIKEQSP------------------------EDEQWFFAGSKDADLTNL 44
            |||||..|.||......::::..                        |.:|.|..   :.||.:.
plant   114 VLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIV---EGDLNDG 175

  Fly    45 AATQALFAREKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQ---TAHEQGCVKVVSCL 106
            ...:.||.....||::||||. .|:.:.|.|...::.:|:....|:|:   .|:.|..  :|...
plant   176 PLLRKLFDVVPFTHILHLAAQ-AGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPA--IVWAS 237

  Fly   107 STCIFPDKTSYPIDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHD 171
            |:.::...|..|..|   .:....|::. |:..|:..:...|.|:..||...|.:....::||..
plant   238 SSSVYGLNTENPFSE---EHRTDQPASL-YAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWG 298

  Fly   172 NYNPEVSH------VIPGM---IYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELM 227
              .|::::      ::.|.   |||          ..:|.:|         .|.|.|..|:.:..
plant   299 --RPDMAYFFFTKDILHGKSIDIYR----------TQDNQEV---------ARDFTYIDDIVKGC 342

  Fly   228 IWVLRNYESVEPIILSADEVQEVTIFEVAQAVAKAFNFN-------GRLVC-------DTSKS-- 276
            :..|   ::.|....|..:.:       .||..:.:|..       ||||.       ..:|.  
plant   343 VGAL---DTAEKSTGSGGKKR-------GQAQLRVYNLGNTSPVPVGRLVSILEGLLGTKAKKHL 397

  Fly   277 -----DGQYKKTASNAKLRSFLPDYAF---TDLETAINASVKWYIENY 316
                 :|....|.:|..|.  ..|:.:   |||...:...||||:..|
plant   398 IKMPRNGDVPYTHANVSLA--YKDFGYKPTTDLAAGLRKFVKWYVGYY 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 77/368 (21%)
GAE6NP_189024.1 Rossmann-fold NAD(P)(+)-binding proteins 114..439 CDD:473865 76/367 (21%)

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