DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and UXS4

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001189772.1 Gene:UXS4 / 819378 AraportID:AT2G47650 Length:449 Species:Arabidopsis thaliana


Alignment Length:345 Identity:71/345 - (20%)
Similarity:114/345 - (33%) Gaps:110/345 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KVLVTGGTGLVGKAL--------EAVIKEQSPEDEQWFFAGSKDADLTNLAATQALFAREKPTHV 59
            :|:||||.|.||..|        :.||...:      ||.|.|:                   :|
plant   122 RVVVTGGAGFVGSHLVDRLMARGDNVIVVDN------FFTGRKE-------------------NV 161

  Fly    60 IHLAAMVGGLFHNMNNNLDFLRNNLL-----------------------------INDNVLQTAH 95
            :|         |..|.|.:.:|::::                             |..||:.|.:
plant   162 MH---------HFNNPNFEMIRHDVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLN 217

  Fly    96 EQGCVKVVSC----LSTC-IFPDKTSYPIDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHD--- 152
            ..|..|.|..    .||. ::.|...:|..||...|..|......|...||..:.....||.   
plant   218 MLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAN 282

  Fly   153 ---KYGRVYTSVIPCNIFGPHDNYNPEVSHVIPGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPL 214
               :..|::      |.:||.             |.....::|:.........:..||:|.|...
plant   283 VEVRIARIF------NTYGPR-------------MCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 328

  Fly   215 RQFVYSRDLAELMIWVLRNYESVEPIILSADEVQEVTIFEVA------QAVAKAFNFNGRLVCDT 273
            |.|.:..||.|.::.::.. |.|.|..|.  ...|.|:.|:|      |.|.:..:.|.::....
plant   329 RSFQFVSDLVEGLMRLMEG-EHVGPFNLG--NPGEFTMLELAKWMVGEQVVQETIDPNAKIEFRP 390

  Fly   274 SKSDGQYKKTASNAKLRSFL 293
            :..|..:|:.....|.:..|
plant   391 NTEDDPHKRKPDITKAKELL 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 71/345 (21%)
UXS4NP_001189772.1 PLN02206 1..440 CDD:177856 71/345 (21%)

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