DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and BEN1

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_182064.1 Gene:BEN1 / 819146 AraportID:AT2G45400 Length:364 Species:Arabidopsis thaliana


Alignment Length:352 Identity:66/352 - (18%)
Similarity:116/352 - (32%) Gaps:117/352 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLVTGGTGLV-----------GKALEAVIKEQSPEDEQWFFAGSKDADLTNLAATQALFARE--- 54
            |.||||:|.|           |.::.|.::..|        .|:| .|::.|  |:..||.|   
plant    40 VCVTGGSGFVASWLIMRLLQRGYSVRATVRTNS--------EGNK-KDISYL--TELPFASERLQ 93

  Fly    55 ------------KPT-----HVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKV 102
                        ||.     .|.|:|       |.|:.|          ::...:|..::....:
plant    94 IFTADLNEPESFKPAIEGCKAVFHVA-------HPMDPN----------SNETEETVTKRTVQGL 141

  Fly   103 VSCLSTCI--------FPDKTSYPI-------------------DETMVHNGPPHPSNYGYSYAK 140
            :..|.:|:        |...::..:                   |..:..|......:..|..:|
plant   142 MGILKSCLDAKTVKRFFYTSSAVTVFYSGGNGGGGGEVDESVWSDVEVFRNQKEKRVSSSYVVSK 206

  Fly   141 RLIDVQNHAYHDKYG-RVYTSVIPCNIFGPHDNYNPEVSHVIPGMIYRMHQLVTEKTDVPENDKV 204
            ...:.....:..|.| .|.|.|||. :.||.      :|..:|..::               ..:
plant   207 MAAETAALEFGGKNGLEVVTLVIPL-VVGPF------ISSSLPSSVF---------------ISL 249

  Fly   205 FTVFGSGMPLRQF-----VYSRDLAELMIWVLRNYESVEPIILSADEVQEVTIFEVAQAVAKAFN 264
            ..:||:......|     |:..|:|..||::|....:....|.|:.|::...:||........|.
plant   250 AMLFGNYKEKYLFDTYNMVHIDDVARAMIFLLEKPVAKGRYICSSVEMKIDEVFEFLSTKFPQFQ 314

  Fly   265 FNGRLVCDTSKSDGQYKKTASNAKLRS 291
            ...   .|.:|...:.:...|:.||:|
plant   315 LPS---IDLNKYKVEKRMGLSSKKLKS 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 66/352 (19%)
BEN1NP_182064.1 FR_SDR_e 40..341 CDD:187661 66/352 (19%)

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