DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and AT2G33630

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_180921.1 Gene:AT2G33630 / 817929 AraportID:AT2G33630 Length:480 Species:Arabidopsis thaliana


Alignment Length:318 Identity:70/318 - (22%)
Similarity:118/318 - (37%) Gaps:103/318 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVTGGTGLVGKA--LEAV-----------IKEQSPEDEQWFFAG--------SKDADLTNLAATQ 48
            :||||.|.||.|  ||.|           ::..||..:....:|        :|..|:.|     
plant    15 VVTGGLGFVGAALCLELVRRGARQVRSFDLRHSSPWSDDLKNSGVRCIQGDVTKKQDVDN----- 74

  Fly    49 ALFAREKPTHVIHLAAMVGGLFHNMNNNLDFLR----NNLLIND--NVLQTAHEQGCVKVVSCLS 107
               |.:....|:|||:      :.|:.. :.||    :.:.||.  |||:.|.:....::| .:|
plant    75 ---ALDGADCVLHLAS------YGMSGK-EMLRFGRCDEVNINGTCNVLEAAFKHEITRIV-YVS 128

  Fly   108 T--CIFPDK---------TSYPIDETMVHNGPPHPSNYG--YSYAKRLIDVQNHAYHDKYG--RV 157
            |  .:|..|         ..:|:|:        |...|.  .|.|::|: ::::....|.|  |:
plant   129 TYNVVFGGKEILNGNEGLPYFPLDD--------HVDAYSRTKSIAEQLV-LKSNGRPFKNGGKRM 184

  Fly   158 YTSVI-PCNIFGP-HDNYNPE-------------------------VSHVIPGMIYRMHQLVTEK 195
            ||..| |..|:|| .|.:.|.                         |.:::..:|.....|:   
plant   185 YTCAIRPAAIYGPGEDRHLPRIVTLTKLGLALFKIGEPSVKSDWIYVENLVLAIILASMGLL--- 246

  Fly   196 TDVPENDKVFTVFG------SGMPLRQFVYSRDLAELMIWVLRNYESVEPIILSADEV 247
            .|:|..:......|      .|.|:..|.:.|.|.:.:.:.|.......|..||..::
plant   247 DDIPGREGQPVAAGQPYFVSDGYPVNTFEFLRPLLKSLDYDLPKCTISVPFALSLGKI 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 70/318 (22%)
AT2G33630NP_180921.1 3Beta_HSD 15..290 CDD:366449 67/302 (22%)
TMEM254 386..472 CDD:464385
Blue background indicates that the domain is not in the aligned region.

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