DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and UXS1

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001240804.1 Gene:UXS1 / 80146 HGNCID:17729 Length:425 Species:Homo sapiens


Alignment Length:331 Identity:75/331 - (22%)
Similarity:125/331 - (37%) Gaps:48/331 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KKVLVTGGTGLVGKAL---------EAVIKE-----QSPEDEQWFFAGSKDADLTNLAATQALFA 52
            |::|:|||.|.||..|         |..:.:     :....|.|.  |.::.:|.|....:.|:.
Human    94 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPLYI 156

  Fly    53 REKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSY 117
              :...:.|||:..... :.|.|.:..|:.|.:...|:|..|...|...:::..|. ::.|...:
Human   157 --EVDQIYHLASPASPP-NYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSE-VYGDPEVH 217

  Fly   118 PIDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYG------RVYTSVIPCNIFGPHDNYNPE 176
            |..|....:..|......|...||:.:...:||..:.|      |::      |.|||..:.|. 
Human   218 PQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIF------NTFGPRMHMND- 275

  Fly   177 VSHVIPGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLRNYESVEPII 241
             ..|:...|.:..|           .:..||:|||...|.|.|..||...:: .|.|.....|:.
Human   276 -GRVVSNFILQALQ-----------GEPLTVYGSGSQTRAFQYVSDLVNGLV-ALMNSNVSSPVN 327

  Fly   242 LSADEVQEVTIFEVAQAVAKAFNFNGRLVCDTSKSDGQYKKTASNAKLRSFLPDYAFTDLETAIN 306
            |...|  |.||.|.||.:.........:...:...|...|:.....|.:..|.......||..:|
Human   328 LGNPE--EHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLN 390

  Fly   307 ASVKWY 312
            .::.::
Human   391 KAIHYF 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 74/330 (22%)
UXS1NP_001240804.1 UXS1_N 4..83 CDD:463356
UGD_SDR_e 94..397 CDD:187541 75/331 (23%)
Blue background indicates that the domain is not in the aligned region.

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