DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and gfus.3

DIOPT Version :9

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001070752.2 Gene:gfus.3 / 550486 ZFINID:ZDB-GENE-050417-317 Length:344 Species:Danio rerio


Alignment Length:319 Identity:189/319 - (59%)
Similarity:237/319 - (74%) Gaps:7/319 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KVLVTGGTGLVGKALEAVIKEQSPEDEQWFFAGSKDADLTNLAATQALFAREKPTHVIHLAAMVG 67
            :||||||:||||:|:|.|:||:....|:|.|..||:|:|.:...|:|:|.:.:||||||||||||
Zfish    33 RVLVTGGSGLVGRAIERVVKEEGRGGEEWTFLSSKEANLLSAKETRAIFEKYRPTHVIHLAAMVG 97

  Fly    68 GLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPS 132
            |||.||..||||.|||:.|||||||||:|.|.||||||||||||||||:|||||||:||||||.|
Zfish    98 GLFRNMRQNLDFWRNNVFINDNVLQTANEFGVVKVVSCLSTCIFPDKTTYPIDETMIHNGPPHDS 162

  Fly   133 NYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNPEVSHVIPGMIYRMHQLVTEKTD 197
            |:||::|||:|||||.....:|||.||:.|..|:||.|||:|.|..||:||:|::.:....|   
Zfish   163 NFGYAFAKRMIDVQNRTCFKQYGRRYTAGILTNVFGAHDNFNIEDGHVLPGLIHKTYLAKKE--- 224

  Fly   198 VPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLRNYESVEPIILSADEVQEVTIFEVAQAVAKA 262
                .|...|:|||.|||||:||.|||.|.:||||.|:.|:|||||..|..|::|.:.|.||..|
Zfish   225 ----GKPLQVWGSGKPLRQFIYSLDLARLFLWVLREYDEVDPIILSVGEEDELSIKDCADAVVDA 285

  Fly   263 FNFNGRLVCDTSKSDGQYKKTASNAKLRSFLPDYAFTDLETAINASVKWYIENYDQARK 321
            ..|||.::.||||:|||:||||||||||.:|||:.||....||..:..|::.|||.|||
Zfish   286 LGFNGDVIYDTSKADGQFKKTASNAKLRQYLPDFQFTPFREAIKETCDWFVANYDIARK 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 183/309 (59%)
Epimerase 4..234 CDD:279681 141/229 (62%)
gfus.3NP_001070752.2 GDP_FS_SDR_e 33..335 CDD:187550 182/308 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580794
Domainoid 1 1.000 304 1.000 Domainoid score I1350
eggNOG 1 0.900 - - E1_COG0451
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 398 1.000 Inparanoid score I1897
OMA 1 1.010 - - QHG62684
OrthoDB 1 1.010 - - D419698at33208
OrthoFinder 1 1.000 - - FOG0003311
OrthoInspector 1 1.000 - - otm25254
orthoMCL 1 0.900 - - OOG6_102554
Panther 1 1.100 - - O PTHR43238
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2209
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

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