DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and mat2b

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_073790610.1 Gene:mat2b / 541347 ZFINID:ZDB-GENE-030131-786 Length:334 Species:Danio rerio


Alignment Length:314 Identity:75/314 - (23%)
Similarity:120/314 - (38%) Gaps:74/314 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KKVLVTGGTGLVGKALEAVIKEQSPEDEQW------------FFAGSKDADLTNLAATQALFARE 54
            ::|||||.|||:|:   ||.||....|  |            ||.   ..:|.:..|.:.:....
Zfish    29 RRVLVTGATGLLGR---AVYKEFKNND--WDALGCGYNRARPFFL---KCNLLDEDAVRGVIQSF 85

  Fly    55 KPTHVIHLAAMVGGLFHNMNNNLDFLRNN----LLINDNVLQTAHEQGCVKVVSCLSTCIFPDKT 115
            :|..::|.||         ....|.:..:    :.:|.:...|..::.....:..:||....|..
Zfish    86 QPHVIVHCAA---------ERRPDVVERHTEAAMNLNVHACATLAKEAGGSFLIYISTDYVFDGR 141

  Fly   116 SYPIDETMVHNGPPHPSN-YGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNPEVSH 179
            :.|..|    |..|:|.| ||.|..:...::..|.......||     |. :||       ||..
Zfish   142 NPPYGE----NDAPNPLNLYGKSKLEGEREILRHCPGAAILRV-----PI-LFG-------EVEK 189

  Fly   180 VIPGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLRNY-------ESV 237
            |....:..:.:.|.|..:....|.....|.:        |:.|:|.    |.||.       :|:
Zfish   190 VEESAVTVLFERVQEGAESCTIDHCQQRFPT--------YTNDVAR----VCRNMAERALQDQSL 242

  Fly   238 EPII-LSADEVQEVTIFEVAQAVAKAFNF-NGRLVCDTSKSDGQYKKTASNAKL 289
            ..|. .||.|  ::|.:|:..|:|.|||. :..|:..|.:..|...:...||:|
Zfish   243 RGIFHYSAKE--QMTKYEMTCAIADAFNLPSSHLIPMTEQPAGAGAQRPQNAQL 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 75/313 (24%)
mat2bXP_073790610.1 None

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