DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and gfus.1

DIOPT Version :9

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001008620.1 Gene:gfus.1 / 494077 ZFINID:ZDB-GENE-040722-1 Length:318 Species:Danio rerio


Alignment Length:320 Identity:191/320 - (59%)
Similarity:242/320 - (75%) Gaps:8/320 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KVLVTGGTGLVGKALEAVIKE-QSPEDEQWFFAGSKDADLTNLAATQALFAREKPTHVIHLAAMV 66
            :||||||:||||:|:|.|:|| :..|.|:|.|..||||:|.:...|:|:|.:.:|||||||||||
Zfish     6 RVLVTGGSGLVGRAIERVVKEGEGREGEEWIFLSSKDANLLSPEETKAVFEKHRPTHVIHLAAMV 70

  Fly    67 GGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSYPIDETMVHNGPPHP 131
            ||||.||..||||.|:|:.|||||||.||:.|.||||||||||||||||:|||||||:||||||.
Zfish    71 GGLFRNMRQNLDFWRSNVFINDNVLQAAHDSGVVKVVSCLSTCIFPDKTTYPIDETMIHNGPPHE 135

  Fly   132 SNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNPEVSHVIPGMIYRMHQLVTEKT 196
            ||:||:||||:|||||.|:..::.|.||:|||.|:||.|||:|.|..||:||:|::.:  :.:|.
Zfish   136 SNFGYAYAKRMIDVQNRAFFQQFNRRYTAVIPTNVFGCHDNFNIEDGHVLPGLIHKTY--IAKKE 198

  Fly   197 DVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLRNYESVEPIILSADEVQEVTIFEVAQAVAK 261
            ..|     ..|:|||.|||||:||.|||.|.:||||.|:.|||||||..|..|::|.:.|.||.:
Zfish   199 GKP-----LVVWGSGRPLRQFIYSLDLARLFVWVLREYDEVEPIILSVGEEDELSIKDAADAVVE 258

  Fly   262 AFNFNGRLVCDTSKSDGQYKKTASNAKLRSFLPDYAFTDLETAINASVKWYIENYDQARK 321
            |..|.|.::.||||:|||:||||||||||.:|||:.||....||..:..|::.|||.|||
Zfish   259 ALEFTGDVIYDTSKADGQFKKTASNAKLRKYLPDFKFTPFREAIKETCDWFVANYDTARK 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 185/310 (60%)
Epimerase 4..234 CDD:279681 143/230 (62%)
gfus.1NP_001008620.1 GDP_FS_SDR_e 6..309 CDD:187550 184/309 (60%)
Epimerase 7..242 CDD:279681 151/241 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580796
Domainoid 1 1.000 304 1.000 Domainoid score I1350
eggNOG 1 0.900 - - E1_COG0451
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2484
Inparanoid 1 1.050 398 1.000 Inparanoid score I1897
OMA 1 1.010 - - QHG62684
OrthoDB 1 1.010 - - D419698at33208
OrthoFinder 1 1.000 - - FOG0003311
OrthoInspector 1 1.000 - - otm25254
orthoMCL 1 0.900 - - OOG6_102554
Panther 1 1.100 - - LDO PTHR43238
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3245
SonicParanoid 1 1.000 - - X2209
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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