DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and gfus.1

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001008620.1 Gene:gfus.1 / 494077 ZFINID:ZDB-GENE-040722-1 Length:318 Species:Danio rerio


Alignment Length:320 Identity:191/320 - (59%)
Similarity:242/320 - (75%) Gaps:8/320 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KVLVTGGTGLVGKALEAVIKE-QSPEDEQWFFAGSKDADLTNLAATQALFAREKPTHVIHLAAMV 66
            :||||||:||||:|:|.|:|| :..|.|:|.|..||||:|.:...|:|:|.:.:|||||||||||
Zfish     6 RVLVTGGSGLVGRAIERVVKEGEGREGEEWIFLSSKDANLLSPEETKAVFEKHRPTHVIHLAAMV 70

  Fly    67 GGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSYPIDETMVHNGPPHP 131
            ||||.||..||||.|:|:.|||||||.||:.|.||||||||||||||||:|||||||:||||||.
Zfish    71 GGLFRNMRQNLDFWRSNVFINDNVLQAAHDSGVVKVVSCLSTCIFPDKTTYPIDETMIHNGPPHE 135

  Fly   132 SNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNPEVSHVIPGMIYRMHQLVTEKT 196
            ||:||:||||:|||||.|:..::.|.||:|||.|:||.|||:|.|..||:||:|::.:  :.:|.
Zfish   136 SNFGYAYAKRMIDVQNRAFFQQFNRRYTAVIPTNVFGCHDNFNIEDGHVLPGLIHKTY--IAKKE 198

  Fly   197 DVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLRNYESVEPIILSADEVQEVTIFEVAQAVAK 261
            ..|     ..|:|||.|||||:||.|||.|.:||||.|:.|||||||..|..|::|.:.|.||.:
Zfish   199 GKP-----LVVWGSGRPLRQFIYSLDLARLFVWVLREYDEVEPIILSVGEEDELSIKDAADAVVE 258

  Fly   262 AFNFNGRLVCDTSKSDGQYKKTASNAKLRSFLPDYAFTDLETAINASVKWYIENYDQARK 321
            |..|.|.::.||||:|||:||||||||||.:|||:.||....||..:..|::.|||.|||
Zfish   259 ALEFTGDVIYDTSKADGQFKKTASNAKLRKYLPDFKFTPFREAIKETCDWFVANYDTARK 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 185/310 (60%)
gfus.1NP_001008620.1 GDP_FS_SDR_e 6..309 CDD:187550 184/309 (60%)

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