DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and gfus.2

DIOPT Version :9

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001003528.1 Gene:gfus.2 / 445134 ZFINID:ZDB-GENE-041014-242 Length:328 Species:Danio rerio


Alignment Length:319 Identity:181/319 - (56%)
Similarity:233/319 - (73%) Gaps:8/319 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KVLVTGGTGLVGKALEAVIKE-QSPEDEQWFFAGSKDADLTNLAATQALFAREKPTHVIHLAAMV 66
            :||||||:||||:|:|.|:|| :..|.|:|.|..||:|:|.:...|:|.|.:.:|||||||||||
Zfish    16 RVLVTGGSGLVGRAIERVVKEGEGREGEEWIFLSSKEANLVSAEQTRAAFEKHRPTHVIHLAAMV 80

  Fly    67 GGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSYPIDETMVHNGPPHP 131
            |||:.||..||||.|||:.||||||..:||.|.||||||||||:|||||.|||||||:|:|.||.
Zfish    81 GGLYRNMRQNLDFWRNNVHINDNVLNMSHEFGVVKVVSCLSTCVFPDKTKYPIDETMMHDGAPHD 145

  Fly   132 SNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNPEVSHVIPGMIYRMHQLVTEKT 196
            |||||:||||:|||.|.|.:.:|||.||:|||.|:||.|||:|.|..||:||:|::.:....|  
Zfish   146 SNYGYAYAKRMIDVHNRALYQQYGRKYTAVIPTNMFGAHDNFNIEDGHVMPGLIHKTYLAKKE-- 208

  Fly   197 DVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLRNYESVEPIILSADEVQEVTIFEVAQAVAK 261
                 .|...|:|||..||||:||.|||.|.:||||||:.|||||:|..|.:|:|:.:...|:.:
Zfish   209 -----GKPLVVWGSGRALRQFIYSLDLARLFVWVLRNYDEVEPIIVSVSEEEELTVKDAVDAIVE 268

  Fly   262 AFNFNGRLVCDTSKSDGQYKKTASNAKLRSFLPDYAFTDLETAINASVKWYIENYDQAR 320
            .|.|.|.::.||||||||.||||:|.|||.:|||:.||..:.|:..:..|:..||:.||
Zfish   269 GFGFKGEVIYDTSKSDGQIKKTANNGKLRRYLPDFKFTPFKEAVKETCDWFAANYETAR 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 177/310 (57%)
Epimerase 4..234 CDD:279681 139/230 (60%)
gfus.2NP_001003528.1 GDP_FS_SDR_e 16..319 CDD:187550 176/309 (57%)
Epimerase 17..249 CDD:279681 145/238 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580795
Domainoid 1 1.000 304 1.000 Domainoid score I1350
eggNOG 1 0.900 - - E1_COG0451
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2484
Inparanoid 1 1.050 398 1.000 Inparanoid score I1897
OMA 1 1.010 - - QHG62684
OrthoDB 1 1.010 - - D419698at33208
OrthoFinder 1 1.000 - - FOG0003311
OrthoInspector 1 1.000 - - otm25254
orthoMCL 1 0.900 - - OOG6_102554
Panther 1 1.100 - - O PTHR43238
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2209
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.770

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