DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and gfus.2

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001003528.1 Gene:gfus.2 / 445134 ZFINID:ZDB-GENE-041014-242 Length:328 Species:Danio rerio


Alignment Length:319 Identity:181/319 - (56%)
Similarity:233/319 - (73%) Gaps:8/319 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KVLVTGGTGLVGKALEAVIKE-QSPEDEQWFFAGSKDADLTNLAATQALFAREKPTHVIHLAAMV 66
            :||||||:||||:|:|.|:|| :..|.|:|.|..||:|:|.:...|:|.|.:.:|||||||||||
Zfish    16 RVLVTGGSGLVGRAIERVVKEGEGREGEEWIFLSSKEANLVSAEQTRAAFEKHRPTHVIHLAAMV 80

  Fly    67 GGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSYPIDETMVHNGPPHP 131
            |||:.||..||||.|||:.||||||..:||.|.||||||||||:|||||.|||||||:|:|.||.
Zfish    81 GGLYRNMRQNLDFWRNNVHINDNVLNMSHEFGVVKVVSCLSTCVFPDKTKYPIDETMMHDGAPHD 145

  Fly   132 SNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNPEVSHVIPGMIYRMHQLVTEKT 196
            |||||:||||:|||.|.|.:.:|||.||:|||.|:||.|||:|.|..||:||:|::.:....|  
Zfish   146 SNYGYAYAKRMIDVHNRALYQQYGRKYTAVIPTNMFGAHDNFNIEDGHVMPGLIHKTYLAKKE-- 208

  Fly   197 DVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLRNYESVEPIILSADEVQEVTIFEVAQAVAK 261
                 .|...|:|||..||||:||.|||.|.:||||||:.|||||:|..|.:|:|:.:...|:.:
Zfish   209 -----GKPLVVWGSGRALRQFIYSLDLARLFVWVLRNYDEVEPIIVSVSEEEELTVKDAVDAIVE 268

  Fly   262 AFNFNGRLVCDTSKSDGQYKKTASNAKLRSFLPDYAFTDLETAINASVKWYIENYDQAR 320
            .|.|.|.::.||||||||.||||:|.|||.:|||:.||..:.|:..:..|:..||:.||
Zfish   269 GFGFKGEVIYDTSKSDGQIKKTANNGKLRRYLPDFKFTPFKEAVKETCDWFAANYETAR 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 177/310 (57%)
gfus.2NP_001003528.1 GDP_FS_SDR_e 16..319 CDD:187550 176/309 (57%)

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