DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and CG7724

DIOPT Version :9

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_648957.1 Gene:CG7724 / 39918 FlyBaseID:FBgn0036698 Length:398 Species:Drosophila melanogaster


Alignment Length:422 Identity:76/422 - (18%)
Similarity:145/422 - (34%) Gaps:144/422 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLVTGGTGLVGKALEAVIKEQSPEDEQWFFAGSKDADL----TNLAATQALFAREKPTHVI---- 60
            :|||||:|.:|:.|   ||:.....|:......:..|:    .|:...:....|   |:|.    
  Fly     9 LLVTGGSGFLGQHL---IKQLLERKEELGIKEIRSLDIVPYKNNIGHEETSLLR---TYVADIGG 67

  Fly    61 HLAAM------VGGLFH-------------------NMNNNLDFLRNNLLINDNVLQTAHEQGCV 100
            .|.|:      |.|:||                   |:|..|..:  :|.|.:||.:..:     
  Fly    68 DLKALSPIFNGVDGVFHCAASVKIEYPPNYEELERVNVNGTLAVV--DLCIQNNVKRLVY----- 125

  Fly   101 KVVSCLSTCIFP---------------DKTSYP-IDETMVHNGPPHPSNYGYSYAKR-----LID 144
              .||.|.|..|               .||..| :|.:.:..........||:.:|.     :::
  Fly   126 --TSCTSVCFVPFKGRSTFSAVINSTESKTDTPTLDSSTLWEQDNQFLIPGYASSKLRAENIVLN 188

  Fly   145 VQNHAYHDKYGRVYTSVIPCNI-FGPHDNYNPEVSHVIPGMIYRMHQLVTEKTD-VPENDKVFTV 207
            ......|::...:.||.:...: :|..|::                 .:||..| :.....||..
  Fly   189 SNGAPLHNQKEYLATSAMRAPLTYGECDSH-----------------FITEIFDFLSTRGWVFPR 236

  Fly   208 FGSGMPLRQFVYSRDLAELMIW-VLRNYESVE---------PIILSADE--------VQEVTI-- 252
            .......:|.||:.::|    | .:..|::::         |:.::.|.        ||::.:  
  Fly   237 IAGVGGKQQLVYAGNVA----WGHICAYKALKVSDKAVNGLPVFVTDDTGINDVSRFVQKMAVLG 297

  Fly   253 -----------------------FEVAQAVAKAF-----NFNGRLVCDTSKSDGQYKKTASNAKL 289
                                   .||...||..:     .::.|.:...:.|...|.:..::..:
  Fly   298 ERFKVKTSWWYVPHFLFFFLAFLLEVVVRVAYPYTKYRLRYSLRAIASYTSSMLMYNRLRASIHM 362

  Fly   290 RSFLPDYAFTDLETAINASVKWYIENYDQARK 321
             .::|.:   |.:.:...|.|||...:||.::
  Fly   363 -DYMPLF---DPDASAERSAKWYATWWDQRQQ 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 73/412 (18%)
Epimerase 4..234 CDD:279681 56/286 (20%)
CG7724NP_648957.1 NADB_Rossmann 8..381 CDD:304358 72/411 (18%)
WcaG 10..356 CDD:223528 68/381 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466362
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0451
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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