DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and Uxs

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_648182.1 Gene:Uxs / 38911 FlyBaseID:FBgn0035848 Length:441 Species:Drosophila melanogaster


Alignment Length:331 Identity:82/331 - (24%)
Similarity:137/331 - (41%) Gaps:48/331 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KKVLVTGGTGLVGKAL---------EAVIKE-----QSPEDEQWFFAGSKDADLTNLAATQALFA 52
            |::|:|||.|.||..|         |.::.:     :....|.|.  |.::.:|.:......||.
  Fly   116 KRILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFTGRKRNVEHWL--GHENFELIHHDIVNPLFI 178

  Fly    53 REKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSY 117
              :...:.|||:..... |.|.|.:..::.|.:...|||..| ::...||:...::.::.|.|.:
  Fly   179 --EIDEIYHLASPASPP-HYMYNPVKTIKTNTMGTINVLGLA-KRVMAKVLIASTSEVYGDPTVH 239

  Fly   118 PIDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPC-NIFGP--HDNYNPEVSH 179
            |..||...:..|......|...||:.:..::|| .|..:|...|... |.:||  |.|....||:
  Fly   240 PQPETYWGHVNPIGPRACYDEGKRVSETLSYAY-AKQEKVQVRVARIFNTYGPRMHMNDGRVVSN 303

  Fly   180 VIPGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVL-RNYESVEPIILS 243
            .|...:               .::..||:|:|...|.|.|..||.:.||.:: .||  .:|:.|.
  Fly   304 FILQAL---------------RNETITVYGNGKQTRSFQYVSDLVDGMIALMASNY--TQPVNLG 351

  Fly   244 ADEVQEVTIFEVAQAVAKAFNFNGRLVCDTSKS--DGQYKKTASNAKLRSFLPDYAFTDLETAIN 306
              ...|.||.|.|:.:.|.  ..|..|...||:  |...::.....:.|..|.......|||.:.
  Fly   352 --NPVEQTIGEFAEIIKKL--VGGPSVIKQSKAMEDDPQRRKPDITRARQLLHWEPKVPLETGLQ 412

  Fly   307 ASVKWY 312
            .::.::
  Fly   413 RTISYF 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 81/330 (25%)
UxsNP_648182.1 UGD_SDR_e 116..419 CDD:187541 82/331 (25%)

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