DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and HSD3B2

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_000189.1 Gene:HSD3B2 / 3284 HGNCID:5218 Length:372 Species:Homo sapiens


Alignment Length:204 Identity:50/204 - (24%)
Similarity:77/204 - (37%) Gaps:58/204 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVTGGTGLVG-------------KALEAVIKEQSPEDEQWFFAGSKDADLTNLAATQALF----- 51
            ||||..||:|             |.:.|:.|...||..:.|   ||..:.|.|...:...     
Human     6 LVTGAGGLLGQRIVRLLVEEKELKEIRALDKAFRPELREEF---SKLQNRTKLTVLEGDILDEPF 67

  Fly    52 ---AREKPTHVIHLAAMVG--GLFHN---MNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLST 108
               |.:..:.|||.|.::.  |:.|.   ||.|:.        ...:|..|..|..|.|....|:
Human    68 LKRACQDVSVVIHTACIIDVFGVTHRESIMNVNVK--------GTQLLLEACVQASVPVFIYTSS 124

  Fly   109 CIFPDKTSYPIDETMVHNGP---------PHPSNYGYSYAKRLID---VQNHAYHDKYG-RVYTS 160
            .......||   :.::.||.         |.|    |.|:|:|.:   :..:.::.|.| .:||.
Human   125 IEVAGPNSY---KEIIQNGHEEEPLENTWPTP----YPYSKKLAEKAVLAANGWNLKNGDTLYTC 182

  Fly   161 VI-PCNIFG 168
            .: |..|:|
Human   183 ALRPTYIYG 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 50/204 (25%)
HSD3B2NP_000189.1 3b-HSD_HSDB1_like_SDR_e 4..356 CDD:187671 50/204 (25%)

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