DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and HSD3B1

DIOPT Version :9

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_000853.1 Gene:HSD3B1 / 3283 HGNCID:5217 Length:373 Species:Homo sapiens


Alignment Length:382 Identity:76/382 - (19%)
Similarity:122/382 - (31%) Gaps:107/382 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVTGGTGLVG-KALEAVIKEQ------------SPEDEQWFFAGSKDADLTNLAATQALF----- 51
            ||||..|.:| :.:..::||:            .||..:.|   ||..:.|.|...:...     
Human     7 LVTGAGGFLGQRIIRLLVKEKELKEIRVLDKAFGPELREEF---SKLQNKTKLTVLEGDILDEPF 68

  Fly    52 ---AREKPTHVIHLAAMVG--GLFHN---MNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLST 108
               |.:..:.:||.|.::.  |:.|.   ||.|:.        ...:|..|..|..|.|....|:
Human    69 LKRACQDVSVIIHTACIIDVFGVTHRESIMNVNVK--------GTQLLLEACVQASVPVFIYTSS 125

  Fly   109 CIFPDKTSYPIDETMVHNGP---------PHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVI-P 163
            .......||   :.::.||.         |.|..:....|::.:...|.......|.:||..: |
Human   126 IEVAGPNSY---KEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLAANGWNLKNGGTLYTCALRP 187

  Fly   164 CNIFGPHDNY------------------------NPEVSHVIPGMIYRMHQLVTEKTDVPENDKV 204
            ..|:|....:                        ||    |..|.:...|.|.......|:  |.
Human   188 MYIYGEGSRFLSASINEALNNNGILSSVGKFSTVNP----VYVGNVAWAHILALRALQDPK--KA 246

  Fly   205 FTVFGSGMPLRQFVYSRDLAELMIWVLRNYESVEPIILSADE--------------VQEVTIFEV 255
            .::.|      ||.|..|......:...||...:...|..|.              :.|:..|.:
Human   247 PSIRG------QFYYISDDTPHQSYDNLNYTLSKEFGLRLDSRWSFPLSLMYWIGFLLEIVSFLL 305

  Fly   256 AQAVAKAFNFNGRLV-CDTSKSDGQYKKTASNAKLRSFLPDYAFTDLETAINASVKW 311
            .........||..:| ...|.....|||...:.   ::.|.|::   |.|...:|:|
Human   306 RPIYTYRPPFNRHIVTLSNSVFTFSYKKAQRDL---AYKPLYSW---EEAKQKTVEW 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 76/382 (20%)
Epimerase 4..234 CDD:279681 57/288 (20%)
HSD3B1NP_000853.1 3b-HSD_HSDB1_like_SDR_e 5..357 CDD:187671 76/382 (20%)
3Beta_HSD 7..287 CDD:279420 61/305 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0451
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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