DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and hsd3b7

DIOPT Version :9

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_956103.1 Gene:hsd3b7 / 327462 ZFINID:ZDB-GENE-030131-5673 Length:368 Species:Danio rerio


Alignment Length:342 Identity:64/342 - (18%)
Similarity:107/342 - (31%) Gaps:102/342 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVTGGTGLVGKALEAVIKE---------------------QSPEDEQWFFAGSKDADLTNLAATQ 48
            ::|||.|.:|:.|..|:.|                     :|.||.:....   ..|:|.....:
Zfish    12 VITGGCGFLGQHLLRVLLEKKKNVKEIRLFDKNVFPSLQSESTEDVKVVII---QGDITKYEDVR 73

  Fly    49 ALFAREKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLS-TCIFP 112
            ..|.  ....|.|.|::| .:::.:...:.| ..|:...:|.::...|.|...:|...| ..:.|
Zfish    74 NAFL--GADLVFHAASLV-DVWYKIPEKVIF-AVNVQGTENAIKACVEIGIQYLVYTSSMEVVGP 134

  Fly   113 -----------DKTSYPIDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVI-PCN 165
                       :.|.|.|...|     |:|.:  .:.|::::...|....:....:||..: |..
Zfish   135 NVKGDEFVRGNEDTPYNIFHEM-----PYPKS--KAAAEKIVLEANGTKVEGGNILYTCCLRPTG 192

  Fly   166 IFGPH-----DNY--------------NPEVSH--VIPGMIYRMHQLVTEKTDVPEN-------- 201
            |:|..     |.|              .|...|  |..|.:..||.|.........|        
Zfish   193 IYGEQHQLMKDFYLNSVRNGGWVMRGVPPHTEHGRVYAGNVAWMHLLAARALQEHPNRLGGECYF 257

  Fly   202 ----------DKVFTVFGSGMPLRQ----------FVYSRDLAELMIWVLRNYESVEPIILSADE 246
                      |:....|.|....|.          ..:..|:..   |||:...:..|::.....
Zfish   258 CYDDSPYKPYDEFNMQFLSAFNFRSLRLPVWMLWIIAWMNDMVR---WVLKPIYNYTPLLNKYTL 319

  Fly   247 VQEVTIFEVAQAVAKAF 263
            ....|.|.|  :..|||
Zfish   320 AVACTSFTV--STDKAF 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 64/342 (19%)
Epimerase 4..234 CDD:279681 57/311 (18%)
hsd3b7NP_956103.1 NADB_Rossmann 11..356 CDD:304358 64/342 (19%)
3Beta_HSD 12..286 CDD:279420 53/287 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0451
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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