DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and Hsd3b7

DIOPT Version :9

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_006230274.1 Gene:Hsd3b7 / 246211 RGDID:628727 Length:369 Species:Rattus norvegicus


Alignment Length:375 Identity:68/375 - (18%)
Similarity:113/375 - (30%) Gaps:144/375 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVTGGTGLVGKALEAVIKEQSPEDEQ----------W---FFAGSKDADLTNLAATQA--LFARE 54
            |||||.|.:|:.:..::.|..|...:          |   ...|...........|||  :.|..
  Rat    13 LVTGGCGFLGEHIVRMLLEWEPRLRELRVFDLHLSSWLEELKTGPVQVTAIQGDVTQAHEVAAAM 77

  Fly    55 KPTH-VIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHE---QGCVKVV-SCLST------ 108
            ..:| |||.|.:| .:|...:.                :|.|:   ||...|: :|:.|      
  Rat    78 AGSHVVIHTAGLV-DVFGKASP----------------ETIHKVNVQGTQNVIDACVQTGTRLLV 125

  Fly   109 ------CIFPDKTSYPI----DET---MVHNGPPHPSNYGYSYAKRLI----------------- 143
                  .:.|:...:|.    ::|   .:|.   ||.....:.|::|:                 
  Rat   126 YTSSMEVVGPNVKGHPFYRGNEDTPYEAIHR---HPYPCSKALAEQLVLEANGRKVNGGLPLVTC 187

  Fly   144 ------------DVQNHAYHD--KYGRVYTSVIPCNIFGPHDNYNPEVSHVIPGMIYRMHQLVT- 193
                        .|....||.  ::|......||.::         |...|..|.:..||.||. 
  Rat   188 ALRPTGIYGEGHQVMRDFYHQGLRFGGRLFRAIPASV---------EHGRVYVGNVAWMHILVAR 243

  Fly   194 --EKTDVPENDKVFTVFGSG--------------------------MPLRQFVYSRDLAELMIWV 230
              |:.......:|:..:...                          :|....|....|..|:.|:
  Rat   244 ELEQRAALMGGQVYFCYDKSPYKSYEDFNMEFLSPCGLRLIGTHPLLPYWLLVLLAALNALLQWL 308

  Fly   231 LRNYESVEPIILSADEVQEVTIFEVAQAVAKAFNFNGRLVCDTSKSDGQY 280
            ||      |::|....:...|:     |||     |......|:|:...:
  Rat   309 LR------PLVLYTPLLNPYTL-----AVA-----NTTFTVSTNKAQRHF 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 68/375 (18%)
Epimerase 4..234 CDD:279681 59/327 (18%)
Hsd3b7XP_006230274.1 NADB_Rossmann 11..361 CDD:304358 68/375 (18%)
3Beta_HSD 13..283 CDD:279420 52/298 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0451
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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