DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and uxs1

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_775349.2 Gene:uxs1 / 192315 ZFINID:ZDB-GENE-020419-37 Length:418 Species:Danio rerio


Alignment Length:331 Identity:73/331 - (22%)
Similarity:125/331 - (37%) Gaps:48/331 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KKVLVTGGTGLVGKAL---------EAVIKE-----QSPEDEQWFFAGSKDADLTNLAATQALFA 52
            |::|:|||.|.||..|         |..:.:     :....|.|.  |.::.:|.|....:.|:.
Zfish    87 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPLYI 149

  Fly    53 REKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSY 117
              :...:.|||:..... :.|.|.:..|:.|.:...|:|..|...|...:::..|. ::.|...:
Zfish   150 --EVDQIYHLASPASPP-NYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSE-VYGDPEVH 210

  Fly   118 PIDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYG------RVYTSVIPCNIFGPHDNYNPE 176
            |.:|....:..|......|...||:.:...:||..:.|      |::      |.||...:.|. 
Zfish   211 PQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIF------NTFGSRMHMND- 268

  Fly   177 VSHVIPGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLRNYESVEPII 241
             ..|:...|.:..|           .:..||:|||...|.|.|..||...:: .|.|.....|:.
Zfish   269 -GRVVSNFILQALQ-----------GEALTVYGSGSQTRAFQYVSDLVNGLV-SLMNSNISSPVN 320

  Fly   242 LSADEVQEVTIFEVAQAVAKAFNFNGRLVCDTSKSDGQYKKTASNAKLRSFLPDYAFTDLETAIN 306
            |...|  |.||.|.||.:.........:.......|...::.....|.:..|.......||..:|
Zfish   321 LGNPE--EHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGLN 383

  Fly   307 ASVKWY 312
            .:::::
Zfish   384 KTIQYF 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 72/330 (22%)
uxs1NP_775349.2 UXS1_N 2..76 CDD:463356
UGD_SDR_e 87..389 CDD:187541 73/329 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..418
Blue background indicates that the domain is not in the aligned region.

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