DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and C32D5.12

DIOPT Version :9

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_495280.1 Gene:C32D5.12 / 174053 WormBaseID:WBGene00016319 Length:357 Species:Caenorhabditis elegans


Alignment Length:258 Identity:61/258 - (23%)
Similarity:105/258 - (40%) Gaps:68/258 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKKVLVTGGTGLVGK-ALEAVIK-EQSPE----DEQWFFAGSKD---------ADLTNLAATQAL 50
            |..|.||||.||||: .::.::: ||..|    |.|   :.|:|         .||.:..:.:. 
 Worm     1 MYTVAVTGGAGLVGRYVVQRLLENEQIAEIRIIDRQ---STSRDESRKVKLYQIDLNDRKSLEN- 61

  Fly    51 FAREKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKT 115
             |......|||.|.....:|::.:..    :|||:..||:      ..|..||..:        |
 Worm    62 -ALRGCDGVIHCAHSPFPIFYSKDKE----QNNLMWRDNL------NACESVVDTM--------T 107

  Fly   116 SYPIDETMVHNG----P-PHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNP 175
            :..| :|:|:.|    | |:..|||.: ....:|...:...|:||...|.         .:.|..
 Worm   108 NLNI-KTLVNIGCAYCPIPNEDNYGLA-QDVFLDYPRNYMLDEYGESRTR---------GEMYAR 161

  Fly   176 EVS--------HVIPGMIYRMHQLVTEKTDVPE----NDKVFTVFGSGMPLRQFVYSRDLAEL 226
            :.:        .:.|..:|.:.:  ::|.|..:    |..:..|.|....:.||:|:.:||.:
 Worm   162 KAAKKGSFNGIFLRPTFVYGLGK--SKKIDTIKELILNSALPFVTGERRGMHQFIYAGNLAAI 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 60/256 (23%)
Epimerase 4..234 CDD:279681 60/255 (24%)
C32D5.12NP_495280.1 MupV_like_SDR_e 4..326 CDD:187573 60/255 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0451
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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