DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and Hsd3b5

DIOPT Version :9

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_032321.2 Gene:Hsd3b5 / 15496 MGIID:104645 Length:373 Species:Mus musculus


Alignment Length:342 Identity:60/342 - (17%)
Similarity:112/342 - (32%) Gaps:107/342 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVTGGTGLVGKALEAVI--KEQSPEDEQWF--FAGSKDADLTNL--------------------A 45
            ||||..|.:|:.:..::  :|:..|....|  |....:.:|:.|                    .
Mouse     7 LVTGAGGFLGQRIVRMLVQEEELQEIRALFRTFGRKHEEELSKLQTKAKVRVLKGDILDAQCLKR 71

  Fly    46 ATQALFAREKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCI 110
            |.|.:.|      |||.||.:        :.|.......:::.|:..|.         ..|..|:
Mouse    72 ACQGMSA------VIHTAAAI--------DPLGAASRQTILDVNLKGTQ---------LLLDACV 113

  Fly   111 FPDKTSYPIDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNP 175
            .....::....:::..||       .||.:.:::.....:.:       |..|          ||
Mouse   114 EASVPTFIYSSSVLVAGP-------NSYKEIILNAHEEEHRE-------STWP----------NP 154

  Fly   176 EVSHVIPGMIYRMHQLVTEKTDVPENDKVFTVFGS--GMPLR-QFVYSRDLAELMIWVLRNYESV 237
                      |...:.:.||..:..|.::....|:  ...|| .|:|..:...       ...:|
Mouse   155 ----------YPYSKRMAEKAVLATNGRLLKNGGTLHTCALRLPFIYGEECQV-------TSTTV 202

  Fly   238 EPIILSADEVQEVTIFEVAQAV-----AKAFNFNGRLVCDTSKS---DGQYKKTASNAKLRSFLP 294
            :..:.:...:::...|.:|..|     |.|.....|.:.|..||   .||:...:.|.      |
Mouse   203 KTALKNNSIIKKNATFSIANPVYVGNAAWAHILAARSLQDPKKSPSIQGQFYYISDNT------P 261

  Fly   295 DYAFTDLETAINASVKW 311
            ..::.||...:  |.:|
Mouse   262 HQSYDDLNYTL--SKEW 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 60/342 (18%)
Epimerase 4..234 CDD:279681 42/255 (16%)
Hsd3b5NP_032321.2 NADB_Rossmann 5..357 CDD:304358 60/342 (18%)
3Beta_HSD 7..287 CDD:279420 60/342 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0451
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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