DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gmer and ZC449.8

DIOPT Version :9

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001257016.1 Gene:ZC449.8 / 13220478 WormBaseID:WBGene00195189 Length:70 Species:Caenorhabditis elegans


Alignment Length:58 Identity:17/58 - (29%)
Similarity:22/58 - (37%) Gaps:5/58 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 RNNLLIN-----DNVLQTAHEQGCVKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSN 133
            :|:|..|     |:.|....|.....|||.|.|....|......|::.|..|...|.|
 Worm     7 KNSLKRNYPDRDDDQLHKETEGVLTNVVSILKTQENQDVAPSFTDQSTVVKGSIPPPN 64

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 17/58 (29%)
Epimerase 4..234 CDD:279681 17/58 (29%)
ZC449.8NP_001257016.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0451
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.