DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gmer and Tdh

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_320583.4 Gene:Tdh / 1280721 VectorBaseID:AGAMI1_012765 Length:361 Species:Anopheles gambiae


Alignment Length:371 Identity:74/371 - (19%)
Similarity:132/371 - (35%) Gaps:119/371 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KVLVTGGTGLVG----KALEAVIKEQS--------PEDE-----QWFFAGSKDADLTNLAATQAL 50
            |:|:|||.|.:|    |.|.:...|:|        |..|     .:.|     ||:.:....|.:
Mosquito    47 KILITGGLGQLGVECAKLLRSQYGEESVILSDIIKPSSEIVNSGPYIF-----ADILDFKGLQKI 106

  Fly    51 FAREKPTHVIHLAAMVGGLFHNMNNNLDF-LRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDK 114
            ....:...:||.:|::..:   ...|:.. :|.|:....|||:.|.:.                |
Mosquito   107 VVDHRVDWIIHFSALLSAI---GEQNVPLAVRVNIEGMHNVLELAKQY----------------K 152

  Fly   115 TSYPIDETMVHNGPPHPSN-------------YGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNI 166
            ....:..|:...||..|.|             ||.|  |...::....||.|:|..:.    |..
Mosquito   153 MRIFVPSTIGAFGPDSPRNPTPNVTIQRPRTIYGVS--KVHAELMGEYYHHKFGLDFR----CLR 211

  Fly   167 FGPHDNYNPEVSHVIPGMIYRMHQLVTEKTDVP---ENDKVFTVFGSGMPLRQF-VYSRDLAEL- 226
            |              ||:|         .:|.|   ..|....||..|:...:: .|.:....| 
Mosquito   212 F--------------PGVI---------SSDPPGGGTTDYAVAVFFEGLKTGKYQCYLKPDTRLP 253

  Fly   227 MIWVLRNYESVEPIILSADE-----VQEVTIF-----EVAQAVAK-------AFNFNGR-LVCDT 273
            |:::.....|:...:.:.:|     |..||..     |:.:.:||       ::..:.| |:.|:
Mosquito   254 MMYIEDCLRSLLEFMTAPEEKLQRRVYNVTAMSFTPEELVEKLAKYIPELHVSYRPDSRQLIADS 318

  Fly   274 SKSDGQYKKTASNAKLRSFLPDYAFT---DLETAINASVKWYIENY 316
                  :.:...:::.|.   |:.:.   ||:..::..|:...|||
Mosquito   319 ------WPQIFDDSEARR---DWGWQHKYDLDKLVDLMVRDVTENY 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 71/366 (19%)
TdhXP_320583.4 None

Return to query results.
Submit another query.