DRSC/TRiP Functional Genomics Resources

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Protein Alignment YME1L and BCS1

DIOPT Version :10

Sequence 1:NP_001246473.1 Gene:YME1L / 37636 FlyBaseID:FBgn0034792 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_010663.1 Gene:BCS1 / 851981 SGDID:S000002783 Length:456 Species:Saccharomyces cerevisiae


Alignment Length:197 Identity:51/197 - (25%)
Similarity:96/197 - (48%) Gaps:31/197 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 LKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAKVPFFHAAGPEFDEVLVGQ 380
            |.:|.:|:|:.:.:|:.|....:|.||.||||:|||...:|:|||.          :::..::..
Yeast   239 LDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGEL----------DYNICILNL 293

  Fly   381 GARRVRD-----LFKAAKARAPCVIFIDEIDSVGAKRTNSVLHPY-ANQTINQLLSEMDGFHQNA 439
            ....:.|     |......|:  ::.:::||:...||:.:....: ::.|.:.||:.:||...:.
Yeast   294 SENNLTDDRLNHLMNNMPERS--ILLLEDIDAAFNKRSQTGEQGFHSSVTFSGLLNALDGVTSSE 356

  Fly   440 GVIVLGATNRRDDLDQALLRPGRFDVEVMV--STP---------DFTGRKEILSLYLTKILHDEI 493
            ..|....||..:.||.|::||||.|.:|.|  :||         .:.|..:|...::..:  .|:
Yeast   357 ETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNATPYQVEKMFMKFYPGETDICKKFVNSV--KEL 419

  Fly   494 DL 495
            |:
Yeast   420 DI 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1LNP_001246473.1 HflB 258..737 CDD:440233 51/197 (26%)
BCS1NP_010663.1 BCS1_N 59..228 CDD:214980
RecA-like_BCS1 238..386 CDD:410918 44/158 (28%)
Blue background indicates that the domain is not in the aligned region.

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