DRSC/TRiP Functional Genomics Resources

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Protein Alignment YME1L and RPT5B

DIOPT Version :10

Sequence 1:NP_001246473.1 Gene:YME1L / 37636 FlyBaseID:FBgn0034792 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_172384.1 Gene:RPT5B / 837431 AraportID:AT1G09100 Length:423 Species:Arabidopsis thaliana


Alignment Length:424 Identity:135/424 - (31%)
Similarity:212/424 - (50%) Gaps:55/424 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 DRSIEAEQKRNPTM--TSRLKNALANSPQRLDGD---TPLQAEKLRRLLAKSEEH-GFNKAESLK 229
            |.|.|.:|..:.|.  ..|....|||..:.|..:   |.|..|.::..:.:::|. ..||    :
plant     8 DTSFEGDQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKIKENQEKIKLNK----Q 68

  Fly   230 IAFAEGYLA--------------AANSE-DSPKSGKTMKYLK--TLQTIVVIVV----------- 266
            :.:..|.:.              .||.: ||.:.||.: .||  |.|||.:.||           
plant    69 LPYLVGNIVEILEMSPEDDAEEDGANIDLDSQRKGKCV-VLKTSTRQTIFLPVVGLVDPDTLKPG 132

  Fly   267 -FLGI----FLSFFTTSNGSVFRSIQLGNQVEVDPEEINVTFEDVKGCDEAKQELKEVVEF-LKS 325
             .:|:    :|...|..  |.:.|.....:|:..|.|   .:.|:.|.::..|||.|.:.. :..
plant   133 DLVGVNKDSYLILDTLP--SEYDSRVKAMEVDEKPTE---DYNDIGGLEKQIQELVEAIVLPMTH 192

  Fly   326 PEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFK 390
            .|:|..||.:.||||||.|||||||||:|||.|.:....|...|||:..::.:|.||:.|||.|.
plant   193 KEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFL 257

  Fly   391 AAKARAPCVIFIDEIDSVGAKRTNSVL--HPYANQTINQLLSEMDGFHQNAGVIVLGATNRRDDL 453
            .||.::||:|||||||::|.||.:|.:  .....:|:.:||:::|||..:..:.|:.||||.|.|
plant   258 LAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADIL 322

  Fly   454 DQALLRPGRFDVEVMVSTPDFTGRKEILSLYLTKI-LHDEIDLDMLARGTSGFTGADLENMINQA 517
            |.||:|.||.|.::....|....|..||.::..|: ::.:::.:.|||.|..|.||.|:.:..:|
plant   323 DPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEA 387

  Fly   518 ALRAAIDGAETVSMKHLETARDKVLMGPERKARL 551
            .:.|....|..|:  |.:.....:.:..::||.|
plant   388 GMLALRRDATEVN--HEDFNEGIIQVQAKKKASL 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1LNP_001246473.1 HflB 258..737 CDD:440233 109/314 (35%)
RPT5BNP_172384.1 PRK03992 31..416 CDD:179699 126/396 (32%)

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