Protein Alignment YME1L and VAR1

DIOPT Version :9

• Sequence 1: NP_001246473.1
• Gene: YME1L / 37636
• FlyBaseID: FBgn0034792
• Length: 740
• Species: Drosophila melanogaster
• Sequence 2: NP_568604.1
• Gene: VAR1 / 834232
• AraportID: AT5G42270
• Length: 704
• Species: Arabidopsis thaliana
• Alignment Length: 775
• Identity: 265/775 - (34%)
• Similarity: 390/775 - (50%)
• Gaps: 119/775 - (15%)

  Fly     5 TTHSVPYLYLGNFSRKPHYYSVNRTKLHGSAGAARLSKSTSTSSRSHDLVLDLRNLLSRSSASIQ 69
            ||.|.|.|...||.......|....|             |:|.|....::...|..:|:|...::
plant     3 TTSSNPLLLSSNFLGSQIIISAPTPK-------------TTTKSLPFSVISRKRYQISQSEKLMK 54

  Fly    70 GMVERAARLNGILDRRLVDDVLAKVTSMLPSMRDVRVTLEESATQIGRVQLQNYQFEVSLT---- 130
            .:..:|| |..:|........||....:.|..  ..:|.|..:.     .|..:...|.:|
plant    55 SLPSQAA-LAALLFSSSSPQALAVNEPVQPPA--PTITAEAQSP-----NLSTFGQNVLMTAPNP 111

  Fly   131 -GAAGSVPTGANVKVIPTITPGLLRPLFSQQQLNQIRGFKTDR----------SIEAEQKRNPTM 184
             ..:..:|.|...:.              .:.||.::..|.:|          .:.|...|..|:
plant   112 QAQSSDLPDGTQWRY--------------SEFLNAVKKGKVERVKFSKDGSVLQLTAVDNRRATV 162

  Fly   185 TSRLKNALANSPQRLDGDTPLQAEKLRRLLAKSEEHGFNKAESLKIAFAEGYLAAANSEDSPKSG 249
                  .:.|.|..:|            :||.:         .:.|:.:||           :.|
plant   163 ------IVPNDPDLID------------ILAMN---------GVDISVSEG-----------EGG 189

  Fly   250 KTM-KYLKTLQTIVVIVVFLGIFLSFFTTSNGSVFRSIQLGNQVEV--------DPEEINVTFED 305
            ..: .::..|  :..::.|.|:|. .|....|.......||..::.        :..|..|||.|
plant   190 NGLFDFIGNL--LFPLLAFGGLFY-LFRGGQGGAGGPGGLGGPMDFGRSKSKFQEVPETGVTFGD 251

  Fly   306 VKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAKVPFFHAAG 370
            |.|.|:||.||:|||:|||:|:|::.||.|:|||.|||||||||||||||||||||.||||..|.
plant   252 VAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAA 316

  Fly   371 PEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKRTNSV--LHPYANQTINQLLSEMD 433
            .||.|:.||.||.||||||:.||::|||::||||||:||.:|...:  .:....|||||||:|||
plant   317 SEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMD 381

  Fly   434 GFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEILSLYLT-KILHDEIDLDM 497
            ||..|:|||||.||||.|.||.|||||||||.:|.|..||..||.:||.::.. |.:..::|.:.
plant   382 GFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEK 446

  Fly   498 LARGTSGFTGADLENMINQAALRAAIDGAETVSMKHLETARDKVLMGPERKARLPDEEANTITAY 562
            :||.|.|||||||:|::|:||:.||....:.:|...:..|.::::.|||:|..:..||...:.||
plant   447 VARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAY 511

  Fly   563 HEGGHAIVAFYTKESHPLHKVTIMPRGPSLGHTAYIPEKERYH---VTKAQLLAMMDTMMGGRAA 624
            ||.|||:|.....|..|:.|::|:|||.:.|.|.:.|.:||..   .:::.|...|...:|||.|
plant   512 HEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVA 576

  Fly   625 EELVFGTDKITSGASSDLKQATSIATHMVRDWGMSDKVGLRTIEASKGLGTGDTLGPN------- 682
            ||::||.:.:|:|||:|..|.:.:|..||..:|.|.|:|.   .|..|.|....||.:
plant   577 EEVIFGDENVTTGASNDFMQVSRVARQMVERFGFSKKIGQ---VAVGGAGGNPFLGQSMSSQKDY 638

  Fly   683 ---TIEAVDAEIKRILSDSYERAKAILRKHTREHKALAEALLKYETLDADDIKAILNESQ 739
               |.:.||||::.::..:|.|||.|:.........||:.|::.||:|.::..::..:.|
plant   639 SMATADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSLFIDGQ 698

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
YME1L	NP_001246473.1	FtsH_fam	254..736	CDD:273520	219/505 (43%)
VAR1	NP_568604.1	FtsH_fam	192..694	CDD:273520	219/507 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0465
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53805
OrthoDB	1	1.010	-	-		D217929at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.830