DRSC/TRiP Functional Genomics Resources

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Protein Alignment YME1L and ftsh7

DIOPT Version :9

Sequence 1:NP_001246473.1 Gene:YME1L / 37636 FlyBaseID:FBgn0034792 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_566889.1 Gene:ftsh7 / 823859 AraportID:AT3G47060 Length:802 Species:Arabidopsis thaliana


Alignment Length:657 Identity:236/657 - (35%)
Similarity:360/657 - (54%) Gaps:64/657 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 VQLQNYQFEVSLTGAAGSVPTGANVKVIPTITPGLLRPLFSQQQLNQIRGFKTDR-----SIEAE 177
            :||....|.:.|......:| |:..::..|..........|:...||::..:.|.     .:..:
plant   145 LQLSVVMFVMRLLRPGIPLP-GSEPRIQTTFVSVPYSEFLSKVNSNQVQKVEVDGVQVLFKLRDD 208

  Fly   178 QKRNPTMTSRLKNALANSPQRLDGDTPLQAEKLRRLLAKSEE--HGFNKAESLKIAFAEGYLAAA 240
            .|...:.||||..:               :|.|.|.:|.::.  :...:...:|..:.:  :...
plant   209 GKWQESETSRLSQS---------------SESLLRTVAPTKRVVYSTTRPGDIKTPYEK--MLGN 256

  Fly   241 NSE-DSPKSGKTMKYLKTLQTIVVIVVFLGIF---LSFFTTSNGSVFRSIQLGNQVEVDPEEIN- 300
            |.| .||:......:...|..:..|.|..|:.   :||.|:|.|.: |:.:.|..   |..::: 
plant   257 NVEFGSPEKRSGGFFNSALIALFYIAVLAGLIRFPVSFSTSSTGQL-RTRKAGGP---DGGKVSG 317

  Fly   301 ----VTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEA 361
                :||.||.|.||||:||:|:||||::|||:..||.:.|:||||||.|||||||||:||||||
plant   318 GGETITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEA 382

  Fly   362 KVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKRTNSVLHPYAN---- 422
            :|||...:..||.|:.||.||.||||||..||..||.:|||||||:| ||..:......:|    
plant   383 EVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAV-AKSRDGKFRMGSNDERE 446

  Fly   423 QTINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEILSLYLTK 487
            ||:||||:|||||..|:.|||||||||.|.||.||.||||||..|.|.|||..||:.||.::::|
plant   447 QTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVHVSK 511

  Fly   488 ---ILHDEIDLDMLARGTSGFTGADLENMINQAALRAAIDGAETVSMKHLETARDKVLMGPERK- 548
               .|.|:::|..:|..|:|||||||.|::|:|||.|.......|.......|.::.:.|.|:| 
plant   512 KELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKIDFIQAVERSIAGIEKKS 576

  Fly   549 ARLPDEEANTITAYHEGGHAIVAFYTKE---SHP-LHKVTIMPR-GPSLGHTAYIP--EKERYHV 606
            |||...| ..:.|.||.|||:|......   ..| :.|::|:|| |.:||.| |||  .::||.:
plant   577 ARLKGNE-KAVVARHEAGHAVVGTAVANLLTGQPRVEKLSILPRTGGALGFT-YIPPTSEDRYLL 639

  Fly   607 TKAQLLAMMDTMMGGRAAEELVFGTDKITSGASSDLKQATSIATHMVRDWGMSDKVGLRTIEASK 671
            ...:||..:.|::|||||||:|: :.:|::||..|:::||.:|...|.::|::.|:|..::....
plant   640 FIDELLGRLVTLLGGRAAEEVVY-SGRISTGAFDDIRRATDMAYKAVAEYGLNQKIGPVSVATLS 703

  Fly   672 GLGTGDTLGP-------NTIEAVDAEIKRILSDSYERAKAILRKHTREHKALAEALLKYETLDAD 729
            |.|..|:.|.       ..::.|..|:..:|..:.:.|.:::|.:....:.|...|.:.|.::.:
plant   704 GGGIDDSGGSPWGRDQGKLVDLVQKEVTILLQSALDVALSVVRANPDVLEGLGAQLEEKEKVEGE 768

  Fly   730 DIKAILN 736
            :::..|:
plant   769 ELQKWLS 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1LNP_001246473.1 FtsH_fam 254..736 CDD:273520 210/511 (41%)
ftsh7NP_566889.1 FtsH_ext 143..264 CDD:284011 24/136 (18%)
FtsH_fam 270..755 CDD:273520 207/492 (42%)
AAA 361..494 CDD:278434 84/133 (63%)
Peptidase_M41 583..755 CDD:279742 53/174 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D217929at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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