DRSC/TRiP Functional Genomics Resources

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Protein Alignment YME1L and AT3G28520

DIOPT Version :10

Sequence 1:NP_001246473.1 Gene:YME1L / 37636 FlyBaseID:FBgn0034792 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_189493.1 Gene:AT3G28520 / 822482 AraportID:AT3G28520 Length:478 Species:Arabidopsis thaliana


Alignment Length:433 Identity:96/433 - (22%)
Similarity:170/433 - (39%) Gaps:116/433 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 LQAEKLRRLLAKSEEHG------FNKAESLKIAFAEGY-----LAAANSEDSPKSGKTMKYLKTL 258
            :...:.:||.||..|:.      .:..|::.:.| :|.     ....:.||...| |..:|| ||
plant    70 ISTARAKRLKAKESENSKSLVLCLDDDEAVVVVF-QGVNVVWSSTVVDKEDKHNS-KEGRYL-TL 131

  Fly   259 -----------QTIVVIVVFLGIFLS-------FFTTSNGSVFRSIQLGNQVEVDPEEINVTFED 305
                       .|.:..|:..|..::       .:|.::.|.:.|...|....| |...:.:||.
plant   132 TFENHHRDIITNTYIDHVLREGKEIALKNRERKLYTNNDSSSYSSWWEGLWSNV-PFNHHASFET 195

  Fly   306 VKGCD-EAKQEL-KEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAKVPFFHA 368
            : |.| :.|:|: |::::|.|..:.:..:.....:|.||.|||||||:.:..|:|.     |.  
plant   196 L-GMDLDKKEEIKKDLIKFTKGKDYYRKVAKPWKRGYLLFGPPGTGKSTMISAIAN-----FL-- 252

  Fly   369 AGPEFD----EVLVGQGARRVRDLFKAAKARAPCVIFIDEID----------------------- 406
               |:|    |:...:....::.|....|.::  ::.|::||                       
plant   253 ---EYDVYDLELTTVKDNAELKKLMLDTKGKS--IVVIEDIDCSLELTEHRKKKKEEDEDKEEKK 312

  Fly   407 -SVGAKRTNSVLHPYANQTINQLLSEMDGFHQNAG--VIVLGATNRRDDLDQALLRPGRFDVEVM 468
             :...||.:.  :..:|.|::.||:.:||......  .|::..||..|:||.||:|.||.|..:.
plant   313 EAENLKRVSG--NNESNVTLSGLLNAIDGLWSACSDEKIIIFTTNFVDNLDPALIRRGRMDYHIE 375

  Fly   469 VSTPDFTGRKEILSLYLTKILHD----------EIDLDMLARGTSGFTGADL-ENMINQA----- 517
            :|...|...|.:...||....||          |:|:          :.||: ||::.::     
plant   376 MSYCRFEAFKVLAKNYLENESHDLYGEIGRLLEEVDV----------SPADVAENLMPKSDEDDA 430

  Fly   518 --ALRAAIDGAETVSMKHLE--------TARDKVLMGPERKAR 550
              ..|..:...|....|.:|        .|.|.|....:.|.:
plant   431 DICFRRLVKSLEEEKKKKIEKEARKNKKKAEDNVKQEKQNKVK 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1LNP_001246473.1 HflB 258..737 CDD:440233 81/369 (22%)
AT3G28520NP_189493.1 AAA_assoc 15..114 CDD:464152 8/44 (18%)
RecA-like_BCS1 206..376 CDD:410918 44/183 (24%)

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