DRSC/TRiP Functional Genomics Resources

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Protein Alignment YME1L and PSMC4

DIOPT Version :10

Sequence 1:NP_001246473.1 Gene:YME1L / 37636 FlyBaseID:FBgn0034792 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_006494.1 Gene:PSMC4 / 5704 HGNCID:9551 Length:418 Species:Homo sapiens


Alignment Length:433 Identity:130/433 - (30%)
Similarity:205/433 - (47%) Gaps:85/433 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 IEAEQKRNPTMT-SRLKNALA---NSPQRLDGDTPLQAEKLRR---LLAKSEEHGFNKAESLKIA 231
            :|..|...|.:: ||.:..|:   ..|:.|: |...:.:||::   .|...||:..::.::||..
Human     8 VEKAQDEIPALSVSRPQTGLSFLGPEPEDLE-DLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKE 71

  Fly   232 FAEGYLAAANSEDSPKSGKTMKYLKTLQTIVVIVVFLGIFL----------------SFFTTSNG 280
            |..     |..|           :|.:|:|.:::   |.||                :::.....
Human    72 FLH-----AQEE-----------VKRIQSIPLVI---GQFLEAVDQNTAIVGSTTGSNYYVRILS 117

  Fly   281 SVFRSIQLGNQ-----------VEVDPEEI-------------NVTFEDVKGCDEAKQELKEVVE 321
            ::.|.:...|.           |:|.|.|.             :|.:.|:.|.|..|||::|.||
Human   118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVE 182

  Fly   322 F-LKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAKVPFFHAAGPEFDEVLVGQGARRV 385
            . |...|.:..:|...|:|||:.||||.|||:||:|||......|....|.||.:..:|:|.|.|
Human   183 LPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMV 247

  Fly   386 RDLFKAAKARAPCVIFIDEIDSVGAKRTNSVLHPYANQT---------INQLLSEMDGFHQNAGV 441
            ||:|:.||..||.:|||||||::..||.::       ||         :.:||::||||.||..|
Human   248 RDVFRLAKENAPAIIFIDEIDAIATKRFDA-------QTGADREVQRILLELLNQMDGFDQNVNV 305

  Fly   442 IVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEILSLYLTKI-LHDEIDLDMLARGTSGF 505
            .|:.||||.|.||.|||||||.|.::....||...::.|.|...:|: |.:|:||:.........
Human   306 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKI 370

  Fly   506 TGADLENMINQAALRAAIDGAETVSMKHLETARDKVLMGPERK 548
            :|||:.::..::.:.|..:....|..|..|.|...|:...|::
Human   371 SGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQE 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1LNP_001246473.1 HflB 258..737 CDD:440233 110/342 (32%)
PSMC4NP_006494.1 PTZ00454 34..418 CDD:240423 124/407 (30%)

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