DRSC/TRiP Functional Genomics Resources

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Protein Alignment YME1L and PSMC2

DIOPT Version :10

Sequence 1:NP_001246473.1 Gene:YME1L / 37636 FlyBaseID:FBgn0034792 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_002794.1 Gene:PSMC2 / 5701 HGNCID:9548 Length:433 Species:Homo sapiens


Alignment Length:441 Identity:136/441 - (30%)
Similarity:209/441 - (47%) Gaps:76/441 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 EVSLTGAAGSVPTGANVKVIPTITPGLLRPLFSQQQLNQIRGFK-TDRSIEAEQKRNPTMTSRLK 189
            :::|....|.......:|.:......||:      ::|::.|.| :|..:..     |.:..   
Human    29 DIALLKTYGQSTYSRQIKQVEDDIQQLLK------KINELTGIKESDTGLAP-----PALWD--- 79

  Fly   190 NALANSPQRLDGDTPLQAEKLRRLLAKSEEHGFNKAESLKIAFAEGYLAAANSEDSPKSGKTMKY 254
              ||...|.|..:.|||..:..:::                        .|:|||.       ||
Human    80 --LAADKQTLQSEQPLQVARCTKII------------------------NADSEDP-------KY 111

  Fly   255 LKTLQTIVVIVVFLGIFLSFFTTSNG---SVFRS---IQLGNQVEVDP--------EEINVTFED 305
            :..::.....||.|...::......|   .|.|:   |.:....::||        |:.:||:.|
Human   112 IINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSD 176

  Fly   306 VKGCDEAKQELKEVVEF-LKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAKVPFFHAA 369
            |.||.|..::|:||||. |..||:|.|||.:.||||||.|||||||||.|||||......|....
Human   177 VGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241

  Fly   370 GPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKR-------TNSVLHPYANQTINQ 427
            |.|..:..||:|||.||:||:.|:.:..|:||.||||::|..|       .|.|     .:|:.:
Human   242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEV-----QRTMLE 301

  Fly   428 LLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEILSLYLTKI-LHD 491
            |::::|||.....:.||.||||.|.||.||:||||.|.::..|.||..||..|..::...: :..
Human   302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVER 366

  Fly   492 EIDLDMLARGTSGFTGADLENMINQAALRAAIDGAETVSMKHLETARDKVL 542
            :|..::|||.....|||::.::..:|.:.|.....:..:.|....|.:||:
Human   367 DIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVI 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1LNP_001246473.1 HflB 258..737 CDD:440233 113/308 (37%)
PSMC2NP_002794.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
PRK03992 44..430 CDD:179699 134/426 (31%)
Blue background indicates that the domain is not in the aligned region.

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