DRSC/TRiP Functional Genomics Resources

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Protein Alignment YME1L and PSMC1

DIOPT Version :10

Sequence 1:NP_001246473.1 Gene:YME1L / 37636 FlyBaseID:FBgn0034792 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_002793.2 Gene:PSMC1 / 5700 HGNCID:9547 Length:440 Species:Homo sapiens


Alignment Length:427 Identity:132/427 - (30%)
Similarity:209/427 - (48%) Gaps:64/427 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 GFKTDRSIEAEQKRNPTMTSRL-----KNALANSPQRLDGDTP--------LQAEKLRRLLAKSE 218
            |.|.|:  :.::|..|.:.:|:     |....::..:|...||        |:.|:::..|...|
Human    14 GKKDDK--DKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEE 76

  Fly   219 EHGFNKAESLKIAFAEGYLAAANSEDSPK----SGKTMKYLKTLQTIV-----VIVVFLG----- 269
            |...|: |.:|      .|.....|:..|    .|..|. :.||:.|:     ::...:|     
Human    77 EFIRNQ-EQMK------PLEEKQEEERSKVDDLRGTPMS-VGTLEEIIDDNHAIVSTSVGSEHYV 133

  Fly   270 IFLSFFTTSNGSVFRSIQLGN--------------------QVEVDPEEINVTFEDVKGCDEAKQ 314
            ..|||..........|:.|.:                    :||..|:|   |:.|:.|.|...|
Human   134 SILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQE---TYADIGGLDNQIQ 195

  Fly   315 ELKEVVEF-LKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAKVPFFHAAGPEFDEVLV 378
            |:||.||. |..||.:..:|.|.||||:|.|||||||||||:|||.:....|....|.|..:..:
Human   196 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 260

  Fly   379 GQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKR--TNSVLHPYANQTINQLLSEMDGFHQNAGV 441
            |.|.:.||:||:.|:..||.::||||||::|.||  :||.......:|:.:||:::|||.....|
Human   261 GDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDV 325

  Fly   442 IVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEILSLYLTKI-LHDEIDLDMLARGTSGF 505
            .|:.||||.:.||.||:||||.|.::....||...:|.|..::.::: |.|::.||.|.......
Human   326 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDL 390

  Fly   506 TGADLENMINQAALRAAIDGAETVSMKHLETARDKVL 542
            :|||::.:..:|.|.|..:....|:.:..:.:::.||
Human   391 SGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVL 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1LNP_001246473.1 HflB 258..737 CDD:440233 108/319 (34%)
PSMC1NP_002793.2 PTZ00361 1..440 CDD:185575 132/427 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49 7/36 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..104 4/25 (16%)

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