DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment YME1L and Yme1l1

DIOPT Version :9

Sequence 1:NP_001246473.1 Gene:YME1L / 37636 FlyBaseID:FBgn0034792 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_038799.1 Gene:Yme1l1 / 27377 MGIID:1351651 Length:715 Species:Mus musculus


Alignment Length:783 Identity:355/783 - (45%)
Similarity:473/783 - (60%) Gaps:124/783 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFSTTTH-----SVPYLYLGNFSRKPHYYSVNRTKLHGSAGAARLSKSTSTSSRSH--------- 51
            |||.::.     ::|..:|.|....|...||              |.:|..|.:.|         
Mouse     1 MFSLSSTVQPQVTIPLSHLINAFHSPKNISV--------------SVNTPVSQKQHRDTVPEHEA 51

  Fly    52 ---DLVLDLRNLLSRSSASIQGMVERAARLNGILDRRLVDDVLAKVTSMLPSM-RDVRVTLEESA 112
               :.||:||:|         |:.|...   |.:|:        .|.::||.. :|.||:   |.
Mouse    52 PSSEPVLNLRDL---------GLSELKI---GQIDK--------MVENLLPGFYKDKRVS---SC 93

  Fly   113 TQIGRVQLQNYQFEVSLTGAAGSVPTGANVKVIPTIT--------PGLLRPLFSQQQ----LNQI 165
            .....:..|:: ||...          .::.:..|:.        |..||.:.|..|    ..|.
Mouse    94 WHTSHISAQSF-FENKY----------GHLDMFSTLRSSSLYRQHPKTLRSICSDLQYFPVFIQS 147

  Fly   166 RGFKTDRSIEAEQKRNPTMTSRLKNALANSPQRLDG----DTPLQAEKLRRLLAKS---EEHGFN 223
            |||||   :::..:|..:.:.||..|...:|..:.|    |.....|.|.:|:...   |.|   
Mouse   148 RGFKT---LKSRTRRLQSTSERLVEAQNIAPSFVKGFLLRDRGTDLESLDKLMKTKNIPEAH--- 206

  Fly   224 KAESLKIAFAEGYLAAANSEDSPKSGKTMKYLKTLQTIVVIVVFLGI-------FLS--FFTTSN 279
             .::.|..||||:|.|     ...:.||...|:..:.|:.:::..||       |||  |.||: 
Mouse   207 -QDAFKTGFAEGFLKA-----QALTQKTNDSLRRTRLILFVLLLFGIYGLLKNPFLSVRFRTTT- 264

  Fly   280 GSVFRSIQLGNQVEVDPEEI-NVTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLV 343
                     |....|||.:: |||||.|||.:||||||:|||||||:|:||:.||||||||:|||
Mouse   265 ---------GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLV 320

  Fly   344 GPPGTGKTLLARAVAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSV 408
            ||||||||||||||||||.|||::|:|.||||:.||.||.|:|:||:.|||.|||||||||:|||
Mouse   321 GPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV 385

  Fly   409 GAKRTNSVLHPYANQTINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPD 473
            |.||..|.:|||:.|||||||:|||||..|.|||::||||..:.||.||:||||||::|.|..||
Mouse   386 GGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPD 450

  Fly   474 FTGRKEILSLYLTKILHDE-IDLDMLARGTSGFTGADLENMINQAALRAAIDGAETVSMKHLETA 537
            ..||.|||..||.||..|: :|.:::||||.||:||:|||::|||||:||:||.|.|:||.||.:
Mouse   451 VKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFS 515

  Fly   538 RDKVLMGPERKARLPDEEANTITAYHEGGHAIVAFYTKESHPLHKVTIMPRGPSLGHTAYIPEKE 602
            :||:||||||::...|.:..|||||||.||||:|:|||::.|::|.|||||||:|||.:.:||.:
Mouse   516 KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPEND 580

  Fly   603 RYHVTKAQLLAMMDTMMGGRAAEELVFGTDKITSGASSDLKQATSIATHMVRDWGMSDKVGLRTI 667
            |::.|:|||||.||..||||.||||:||||.||:|||||...||.||..||..:|||:|:|:.|.
Mouse   581 RWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY 645

  Fly   668 EASKGLGTGDTLGPNTIEAVDAEIKRILSDSYERAKAILRKHTREHKALAEALLKYETLDADDIK 732
            .     .|| .|.|.|..|::.||:.:|.:||||||.||:.|.:|||.||||||.||||||.:|:
Mouse   646 S-----DTG-KLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQ 704

  Fly   733 AIL 735
            .:|
Mouse   705 IVL 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1LNP_001246473.1 FtsH_fam 254..736 CDD:273520 290/493 (59%)
Yme1l1NP_038799.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..54 3/19 (16%)
P-loop_NTPase 273..>337 CDD:304359 50/63 (79%)
FtsH_fam 275..708 CDD:273520 276/439 (63%)
AAA 317..448 CDD:278434 92/130 (71%)
Peptidase_M41 528..706 CDD:279742 104/183 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835236
Domainoid 1 1.000 206 1.000 Domainoid score I2911
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31996
Inparanoid 1 1.050 570 1.000 Inparanoid score I1056
Isobase 1 0.950 - 0 Normalized mean entropy S1086
OMA 1 1.010 - - QHG53805
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003122
OrthoInspector 1 1.000 - - oto93544
orthoMCL 1 0.900 - - OOG6_101196
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1955
SonicParanoid 1 1.000 - - X2093
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.640

Return to query results.
Submit another query.