DRSC/TRiP Functional Genomics Resources

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Protein Alignment YME1L and Y47C4A.1

DIOPT Version :10

Sequence 1:NP_001246473.1 Gene:YME1L / 37636 FlyBaseID:FBgn0034792 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001362034.1 Gene:Y47C4A.1 / 189973 WormBaseID:WBGene00021615 Length:388 Species:Caenorhabditis elegans


Alignment Length:427 Identity:137/427 - (32%)
Similarity:198/427 - (46%) Gaps:108/427 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 VDP------EEINVTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTL 352
            :||      :::.:.|:||.||.|||.|::|.|::||:|.:|:            ||..|     
 Worm    16 IDPHSVEGKKQLKIKFKDVAGCSEAKVEIREFVDYLKNPGRFT------------VGISG----- 63

  Fly   353 LARAVAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKRTNSVL 417
                                      |.|..                                  
 Worm    64 --------------------------GSGEE---------------------------------- 68

  Fly   418 HPYANQTINQLLSEMDGFHQ-NAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEIL 481
                .||:||||.|||.... |..|:||.:|||.|.||:|||||||||..:.:..|....||::.
 Worm    69 ----EQTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERKDMF 129

  Fly   482 SLYLTKILHDEIDLD---MLARGTSGFTGADLENMINQAALRAAIDGAETVSMKHLETARDKVLM 543
            .||:.||..|....:   .||..|..|||||:.|:.|::|:|||.:....|::|.:|.|.|:||.
 Worm   130 ELYMRKIKLDHAPQEYSQRLAVLTPSFTGADIMNVCNESAIRAASNKCHVVTIKDMEYALDRVLA 194

  Fly   544 GPERKARLPDEEANTITAYHEGGHAIVAFYTKESHPLHKVTIMPR-GPSLGHTAYIPEKERYHVT 607
            |.|:::|...||...:.||||.|||:|.:..:.:..|.||||:|: ..:||...|.|..:::..:
 Worm   195 GSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTDALLKVTIIPQTSAALGFAQYSPRDDKHLYS 259

  Fly   608 KAQLLAMMDTMMGGRAAEELVFGTDKITSGASSDLKQATSIATHMVRDWGMSDKVGLRTIEASKG 672
            |.:|...|..|:|||.||.|.||  :|||||..||::.|..|...|:.:|||..||..:.     
 Worm   260 KDELFDRMCMMLGGRCAENLKFG--RITSGAQDDLQKMTKSAYAQVKLYGMSSIVGPLSF----- 317

  Fly   673 LGTGDTLGPNTIE-AVDAEIKRILSDSYERAKAILRK 708
                    |||.. .:...:|:..|...:.|..|:.|
 Worm   318 --------PNTERFQIKPYLKKFASTFDQEATLIVAK 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1LNP_001246473.1 HflB 258..737 CDD:440233 137/427 (32%)
Y47C4A.1NP_001362034.1 HflB <24..370 CDD:440233 135/419 (32%)

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