DRSC/TRiP Functional Genomics Resources

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Protein Alignment YME1L and C10G11.8

DIOPT Version :10

Sequence 1:NP_001246473.1 Gene:YME1L / 37636 FlyBaseID:FBgn0034792 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001379656.1 Gene:C10G11.8 / 172324 WormBaseID:WBGene00015688 Length:438 Species:Caenorhabditis elegans


Alignment Length:460 Identity:136/460 - (29%)
Similarity:219/460 - (47%) Gaps:83/460 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 PTGANVKV--------------IPTITPG---LLRPLFSQQQLNQIRGFKTDRSIEAEQKRNPTM 184
            ||.|.:|:              :||:.|.   |:|.|    ::|:|..:     ::.|::.....
 Worm    15 PTHAAMKIAMKSGRRGIENANKLPTVAPKRQCLVRLL----KMNRIHDY-----LQLEKEFITRQ 70

  Fly   185 TSRLKNALANSPQR-------LDGDTPLQAEKLRRLLAKSEEHGFNKAESLKIAFAEGYLAAANS 242
            |||....||...:|       |.| ||....::..|. ..|:|.....|..:   .|.|:...:.
 Worm    71 TSRHGRPLAVQKRREQQLVQSLRG-TPTTLARVHELF-DDEKHAVVVVEGSR---REWYVPILSI 130

  Fly   243 EDSPKSGKTMKYLKTLQTIVVIVVFLGIFLSFFTTSNGSVFRSI---------------QLGNQV 292
            .|        |.|..|..:|::             ..|.:|:::               .:|::|
 Worm   131 VD--------KDLLRLNALVMV-------------KAGGMFKTVPSAIVGVLDDKIDSNAMGHKV 174

  Fly   293 EVDPEEINVTFEDVKGCDEAKQELKEVVEF-LKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARA 356
            |..|:|   ||:|:.||:...|||||.||. |..||.:..:|...||||:|.|.|||||||||:|
 Worm   175 EKTPKE---TFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKA 236

  Fly   357 VAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKR--TNSVLHP 419
            ||......|..|.|.:..:...|:|||.||.:|:.||.:||.::||||||:||.||  |:|....
 Worm   237 VANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFDTSSRGEQ 301

  Fly   420 YANQTINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEILSLY 484
            ...:|:.:||:::|||.....|.::.||||.|.||.||:||||.|.::.:..||...|::|.:::
 Worm   302 EVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIELPKPDEKTRQKIFTIH 366

  Fly   485 LTKI-LHDEIDLDMLARGTSGFTGADLENMINQAALRAAIDGAETVSMKHLETARDKVLMGPERK 548
            .:.: :...:..:.:.......:||:::.:..:|.:.|.....:.|.....|.|...|::  .:|
 Worm   367 TSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRKCVGTDDFEKAVKSVML--SKK 429

  Fly   549 ARLPD 553
            ...|:
 Worm   430 GGAPE 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1LNP_001246473.1 HflB 258..737 CDD:440233 104/315 (33%)
C10G11.8NP_001379656.1 PTZ00361 9..437 CDD:185575 136/460 (30%)

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