DRSC/TRiP Functional Genomics Resources

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Protein Alignment YME1L and Bcs1

DIOPT Version :10

Sequence 1:NP_001246473.1 Gene:YME1L / 37636 FlyBaseID:FBgn0034792 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_313188.3 Gene:Bcs1 / 1274111 VectorBaseID:AGAMI1_001322 Length:424 Species:Anopheles gambiae


Alignment Length:535 Identity:124/535 - (23%)
Similarity:183/535 - (34%) Gaps:172/535 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 YLGNFSRKPHYYSVNRTKLHGSAGAARLSKSTSTSSRSHDLVLDLRNLLSRSSASIQGMVERAAR 77
            |:|..|..| |:..........||||.|.|                        .:||.:     
Mosquito     6 YIGALSENP-YFGAGFGLFGVGAGAAMLRK------------------------GMQGAM----- 40

  Fly    78 LNGILDRRLVDDVLAKVTSMLPSMRDVRVTLEESATQIGRVQLQNYQFEVSLTGA-AGSVPTGAN 141
               ||.||..     .:|..:|........|.:..||.|..|.|:...|.|.... .|.:.|  .
Mosquito    41 ---ILFRRHY-----MITLEVPCRDKSYQWLLQWITQKGARQTQHLSVETSFEQRDTGHIKT--R 95

  Fly   142 VKVIPTITPGLLRPLFSQQQLNQIRG--FKTDRSIEAEQKRNPTMTSRLKNALANSPQRLDGDTP 204
            ...||::...::|          ..|  .|.||:.|..     |:.             |....|
Mosquito    96 YDFIPSVGTHIMR----------YGGTWIKVDRAREQH-----TLD-------------LHMGVP 132

  Fly   205 LQAEKLRRLLAKSEEHGFNKAESLKIAFAEGYLAAANSEDSPKSGKTMKYLKTLQTIVVIVVFLG 269
            .:..:|...       |.:|....||......||..|:|     |||:.|               
Mosquito   133 WETVQLTAF-------GRDKNLYFKILEEARQLALKNTE-----GKTIMY--------------- 170

  Fly   270 IFLSFFTTSNGSVFRSI-------QLGNQVEVDPEEINVTFEDVKGCDEAKQE--LKEVVEFLKS 325
                   |:.||.:|..       .:|:.|                .||...|  |::..||:|:
Mosquito   171 -------TAMGSEWRPFGHPRKRRPIGSVV----------------LDEGVSERILRDCREFIKN 212

  Fly   326 PEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAKVPFFHAAGPEFDEVLVGQGAR-----RV 385
            |:.:|:.|....:|.||.||||.||:....|:|||.          ||...|:....|     |:
Mosquito   213 PQWYSDRGIPYRRGYLLHGPPGCGKSSFITALAGEI----------EFGICLLNLSERGLTDDRL 267

  Fly   386 RDLFKAAKARAPCVIFIDEIDSVGAKRTNSVLHPYANQTINQ-----LLSEMDGFHQNAGVIVLG 445
            ..|...|..::  :|.:::||:....|.:::....|.:.:|:     ||:.:||.......||..
Mosquito   268 NHLMNVAPQQS--IILLEDIDAAFVSRQDTLQQKAAYEGLNRVTFSGLLNCLDGVASTEARIVFM 330

  Fly   446 ATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEILSLYLTKILHDEIDLDMLARGTSGFTGADL 510
            .||..:.||.||:||||.||:..|.   ...|.::..::                 ...:||.|.
Mosquito   331 TTNYLERLDPALIRPGRVDVKEYVG---HCSRHQLEQMF-----------------RRFYTGTDA 375

  Fly   511 ENMINQAALRAAIDG 525
            |......|.|.|.||
Mosquito   376 EANARIFAERVAADG 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1LNP_001246473.1 HflB 258..737 CDD:440233 71/287 (25%)
Bcs1XP_313188.3 BCS1_N 23..192 CDD:214980 53/269 (20%)
RecA-like_BCS1 202..354 CDD:410918 51/163 (31%)

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