DRSC/TRiP Functional Genomics Resources

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Protein Alignment YME1L and Rpt5

DIOPT Version :10

Sequence 1:NP_001246473.1 Gene:YME1L / 37636 FlyBaseID:FBgn0034792 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_310465.3 Gene:Rpt5 / 1271616 VectorBaseID:AGAMI1_003806 Length:427 Species:Anopheles gambiae


Alignment Length:265 Identity:106/265 - (40%)
Similarity:155/265 - (58%) Gaps:9/265 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 VEVDPEEINVTFEDVKGCDEAKQELKEVVEF-LKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLAR 355
            :||| |.....:.|:.|.|:..|||.|.|.. :...:||.|||...||||||.||||||||||||
Mosquito   163 MEVD-ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKDKFKNLGIHPPKGVLLYGPPGTGKTLLAR 226

  Fly   356 AVAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKRTNS--VLH 418
            |.|.:.|..|...|||:..::.:|.||:.|||.|..||.::|.:|||||:|::|.||.:|  ...
Mosquito   227 ACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGD 291

  Fly   419 PYANQTINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEILSL 483
            ....:|:.:||:::|||...|.:.|:.||||.|.||.||||.||.|.::....|:...|..|:.:
Mosquito   292 REVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQI 356

  Fly   484 YLTKI-LHDEIDLDMLARGTSGFTGADLENMINQAALRAAIDGAETVSMKHLETARDKVL-MGPE 546
            :..|: :..:::.:.|||.|..|.||..:.:..:|.:.|....|  ||:.| |...|.:: :..:
Mosquito   357 HSRKMNVSPDVNFEELARSTDDFNGAQCKAVCVEAGMIALRRSA--VSVIH-EDFMDAIMEVQSK 418

  Fly   547 RKARL 551
            :||.|
Mosquito   419 KKANL 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1LNP_001246473.1 HflB 258..737 CDD:440233 106/265 (40%)
Rpt5XP_310465.3 PRK03992 27..420 CDD:179699 103/260 (40%)

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