DRSC/TRiP Functional Genomics Resources

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Protein Alignment YME1L and Rpt1

DIOPT Version :10

Sequence 1:NP_001246473.1 Gene:YME1L / 37636 FlyBaseID:FBgn0034792 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_309476.3 Gene:Rpt1 / 1270756 VectorBaseID:AGAMI1_001458 Length:434 Species:Anopheles gambiae


Alignment Length:466 Identity:143/466 - (30%)
Similarity:221/466 - (47%) Gaps:80/466 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 MRDVRVTLEESATQIGRVQLQNYQFEVSLTGAAGSVPTGANVKVIPTITPGLLRPLFSQQQLNQI 165
            ||.|:...:|...:|..:.    :.::.|....|.   |...|.|..|...:.:   :.:|:|::
Mosquito     9 MRKVKADNKEVEPEIEALD----EVDIELLKTYGQ---GQYHKSIKQIDEDIQK---AMKQVNEL 63

  Fly   166 RGFK-TDRSIEAEQKRNPTMTSRLKNALANSPQRLDGDTPLQAEKLRRLLAKSEEHGFNKAESLK 229
            .|.| :|..:..     |.:..     ||:..|.|..:.|||..:..:::               
Mosquito    64 TGIKESDTGLAP-----PALWD-----LASDKQILQNEQPLQVARCTKII--------------- 103

  Fly   230 IAFAEGYLAAANSEDSPKSGKTMKYLKTLQTIVVIVVFLGIFLSFFTTSNG---SVFRS---IQL 288
                     .|:|:|.       ||:..::.....||.|...::......|   .|.|:   |.:
Mosquito   104 ---------NADSDDP-------KYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHI 152

  Fly   289 GNQVEVDP--------EEINVTFEDVKGCDEAKQELKEVVEF-LKSPEKFSNLGGKLPKGVLLVG 344
            ....::||        |:.:||:.||.||.|..::|:||||. |..||||.|||.:.||||||.|
Mosquito   153 PLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFG 217

  Fly   345 PPGTGKTLLARAVAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVG 409
            ||||||||.|||||......|....|.|..:..||:|||.||:||:.|:::..|:||.||||::|
Mosquito   218 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIG 282

  Fly   410 AKR-------TNSVLHPYANQTINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEV 467
            ..|       .|.|     .:|:.:|::::|||.....:.||.||||.|.||.||:||||.|.:|
Mosquito   283 GARFDDGAGGDNEV-----QRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 342

  Fly   468 MVSTPDFTGRKEILSLYLTKI-LHDEIDLDMLARGTSGFTGADLENMINQAALRAAIDGAETVSM 531
            ....||..||..|..::...: :..:|..::|||.....|||::.::..:|.:.|.....:..:.
Mosquito   343 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATE 407

  Fly   532 KHLETARDKVL 542
            |....|.:||:
Mosquito   408 KDFLEAVNKVI 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1LNP_001246473.1 HflB 258..737 CDD:440233 114/308 (37%)
Rpt1XP_309476.3 None

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