DRSC/TRiP Functional Genomics Resources

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Protein Alignment YME1L and Rpt6

DIOPT Version :10

Sequence 1:NP_001246473.1 Gene:YME1L / 37636 FlyBaseID:FBgn0034792 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_061499158.1 Gene:Rpt6 / 1269903 VectorBaseID:AGAMI1_011589 Length:412 Species:Anopheles gambiae


Alignment Length:268 Identity:106/268 - (39%)
Similarity:157/268 - (58%) Gaps:12/268 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 EVDP-------EEI-NVTFEDVKGCDEAKQELKEVVEF-LKSPEKFSNLGGKLPKGVLLVGPPGT 348
            :|||       |:: :.|:|.|.|.|:..:|:|||:|. :|.||.|..||...||||||.|||||
Mosquito   136 KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 200

  Fly   349 GKTLLARAVAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKR- 412
            ||||||||||...:..|...:|.|..:..:|:|:|.||:||..|:..||.:||:|||||:|:.| 
Mosquito   201 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRI 265

  Fly   413 -TNSVLHPYANQTINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTG 476
             :.|.......:|:.:||:::|||.....:.|:.||||.|.||.|||||||.|.::....|:...
Mosquito   266 ESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEA 330

  Fly   477 RKEILSLYLTKI-LHDEIDLDMLARGTSGFTGADLENMINQAALRAAIDGAETVSMKHLETARDK 540
            |.:||.::..|: |...|:|..:|....|.:||:::.:..:|.:.|..:....|:.:..|.|..|
Mosquito   331 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAK 395

  Fly   541 VLMGPERK 548
            |:.....|
Mosquito   396 VMQKDSEK 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1LNP_001246473.1 HflB 258..737 CDD:440233 106/268 (40%)
Rpt6XP_061499158.1 None

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