DRSC/TRiP Functional Genomics Resources

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Protein Alignment EMC8-9 and Emc8

DIOPT Version :10

Sequence 1:NP_611731.1 Gene:EMC8-9 / 37635 FlyBaseID:FBgn0034791 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_001012165.1 Gene:Emc8 / 361425 RGDID:1311219 Length:207 Species:Rattus norvegicus


Alignment Length:204 Identity:81/204 - (39%)
Similarity:105/204 - (51%) Gaps:21/204 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KVSERAYAKLIFHAAKYPHQAVNGLLLAEK--------TSKGSQVEIVDAIPLFHQCLYVTPMAE 61
            |::.:||.|::.|.|||||.||||||:||:        ...|:....||.|||||..|.:|||.|
  Rat     5 KLTTQAYCKMVLHGAKYPHCAVNGLLVAERQRPRKEHPPGAGNHTLFVDCIPLFHGTLALTPMLE 69

  Fly    62 VALMLIDAHAEREGLVIAGYYAAPENFYD---NQVDKTPAAKIADKIQENFKNACFVVVDNKLMT 123
            |||.|||:..:....||||||.|.|...|   |||    |.|:|.:|.|.|.:|..::|||...|
  Rat    70 VALTLIDSWCKDNSYVIAGYYQANERVKDASPNQV----AEKVASRIAEGFSDAALIMVDNAKFT 130

  Fly   124 LQHDRAAIQVFNCPGDSGARWSKAKFTLSQASDTLEGVSL---LLKRGAMRDLVDFDNHLDNPDK 185
            :......|.|:.   ....||...........|..|...:   ||...:...|||||||||:...
  Rat   131 MDCAAPTIHVYE---QHENRWRCRDPHHDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRS 192

  Fly   186 NWTNDFLNQ 194
            :|||..:|:
  Rat   193 DWTNPEINK 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EMC8-9NP_611731.1 UPF0172 4..192 CDD:461011 80/200 (40%)
Emc8NP_001012165.1 MPN_UPF0172 6..196 CDD:163691 77/196 (39%)

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