DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fd59A and foxc1b

DIOPT Version :9

Sequence 1:NP_523814.1 Gene:fd59A / 37631 FlyBaseID:FBgn0004896 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_571804.1 Gene:foxc1b / 79375 ZFINID:ZDB-GENE-010302-2 Length:433 Species:Danio rerio


Alignment Length:403 Identity:119/403 - (29%)
Similarity:168/403 - (41%) Gaps:106/403 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 GSGSSGGP---------LVKPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQ 130
            |...:.||         :|||||||||||||||..|..||:||:||..|||.|||:|:|....||
Zfish    55 GMARAYGPYAPAQQPKDMVKPPYSYIALITMAIQNSSDKKITLNGIYQFIMERFPFYRDNKQGWQ 119

  Fly   131 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKRYKRAPTMQRFSFPAV 195
            ||||||||||:||:||||:...||||::|||||.:.:||:||||||||:|:|:...::.      
Zfish   120 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVLRE------ 178

  Fly   196 FGTLSPFWIRKPVPLVPVHFNVPNFNGSREFDVVHNPADVFDSALRADKKFNFFANAEASFYQGS 260
                                     ...|:.....||....:...:...|......      :..
Zfish   179 -------------------------KEDRDRQGKDNPGQACEQDAQQPVKLRDIKT------ENG 212

  Fly   261 QSGDKFDRLPFMNRGRGADVLDALPHSSG---SGGGVGGGSESSRGSKYKSPYAFDVATVASAAG 322
            ......|..|         .|..:|.:..   |||....||..|:..:    .||.:.|:.:  |
Zfish   213 ACTPPHDSTP---------PLSTVPKTESPDRSGGSACSGSPQSQTPQ----QAFSMDTIMT--G 262

  Fly   323 IPGHRDYAERLSAGGGYMDLNV------------YND--------DADTEADAEAEGD----DDS 363
            :.|...:|..|.|....:..:|            |:.        ..:.:|.:...||    ||:
Zfish   263 LRGSPQHAAELPASRAALPGSVSLTYSPTPQPAHYSPPCGQPATYHCNMQATSLYTGDRGHGDDT 327

  Fly   364 CEDKIDVESGNEQEDSHISDSVDS--ACTNRLDAPPEALIFEASAE---ASDSSP---------R 414
            ..:..:..:.:.....|.|.|.:|  ...||| ||   .....|.|   .|.|.|         |
Zfish   328 LPEYTNTTNASSISHPHQSSSQESQHLQQNRL-AP---WYLNQSGELGHLSASYPGQQQNFHAVR 388

  Fly   415 RRFDSEPLVLRTS 427
            ..|:::.:.|.:|
Zfish   389 EMFETQRIALNSS 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd59ANP_523814.1 Forkhead 85..171 CDD:278670 58/85 (68%)
foxc1bNP_571804.1 Forkhead 74..160 CDD:278670 58/85 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..250 14/121 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..355 8/36 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.