DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fd59A and foxq1

DIOPT Version :9

Sequence 1:NP_523814.1 Gene:fd59A / 37631 FlyBaseID:FBgn0004896 Length:456 Species:Drosophila melanogaster
Sequence 2:XP_002934447.2 Gene:foxq1 / 733448 XenbaseID:XB-GENE-483842 Length:437 Species:Xenopus tropicalis


Alignment Length:492 Identity:132/492 - (26%)
Similarity:188/492 - (38%) Gaps:144/492 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SLSPPLIKSSRG------GSSIGNGIGCSASSRTAA--ADAMSMGCDDSD-IEPSSMGGSGAAGG 71
            ||..||  ||||      |..:.|........|...  .|..|:|.|:.| :|..........|.
 Frog    23 SLPSPL--SSRGEELGSDGDFVANSPNHVLCPRDCEMDTDTGSLGGDEEDEVEEEEEVNPERNGV 85

  Fly    72 NGDGSGSSGGPLV------------KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKD 124
            :.|||......:|            ||||||||||.|||..|...:|||:.|.|::|.:||:::.
 Frog    86 SADGSTQCRAQIVEGGKTKTYTRRPKPPYSYIALIAMAIKDSASGRLTLAEINDYLMKKFPFFRG 150

  Fly   125 KFPAWQNSIRHNLSLNDCFIKVPREPGNP-GKGNFWTLDPLAEDMFDNGSFLRRRKRYKRA---- 184
            .:..|:||:||||||||||:||.|:|..| ||.|:|.|:|.:|..|.:|.|.|||||..|.    
 Frog   151 SYTGWRNSVRHNLSLNDCFVKVLRDPSRPWGKDNYWMLNPNSEYTFADGVFRRRRKRLNRVTKCL 215

  Fly   185 -----------------PT-MQRFSFPAVFGTLSPFWIRKPVPLVPVHFNVPNFNGSREFDVVHN 231
                             || ..:.|.|:     |...|..|        :.|:.:.:.       
 Frog   216 KEQDLQGLAEQQHQMMNPTKASQGSSPS-----SSRLIMAP--------SAPSSSSTN------- 260

  Fly   232 PADVFDSALRADKKFNFFANAEASFYQGSQSGDKFD---------RLPFMNRGRGADVLDALPHS 287
                 .|:.|:.|:.|              ||.||.         ..||..|.|..|     |.|
 Frog   261 -----SSSNRSAKETN--------------SGTKFSSSFAIESILSKPFQRREREPD-----PRS 301

  Fly   288 SGSGGGVGGGSESSR-----GSKYKSP-----YAFDVATVASAAGIPGHRDYAERLSAGGGYMDL 342
            |           |.|     |:...||     |.....|.::....|........|::....:.|
 Frog   302 S-----------SGRILWPTGALLHSPSSAPSYPIVSYTPSTTLPAPSALYPISPLASNASSLHL 355

  Fly   343 NVYNDDADTEADAEAEGDDDSCEDKIDVESGNEQEDSHIS-DSVDSACTNRLDAPPE-ALIFEAS 405
            .:|.                .|..:..:...:.:.:.|:| |..|...::|:  ||: ..:|...
 Frog   356 QLYR----------------YCMPEALLLLMDPRSEGHLSPDPRDDQLSHRV--PPQHPHLFSPP 402

  Fly   406 AEASDSSPRRRFDSEPLVLRTSKQSSA-KDFRIETLI 441
            ......|.:.   ..|.:|||.:.:.| ..:|.|||:
 Frog   403 CSTKTLSEQL---GNPELLRTLRTAGAYHPYRHETLL 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd59ANP_523814.1 Forkhead 85..171 CDD:278670 48/86 (56%)
foxq1XP_002934447.2 FH_FOXQ1-like 111..189 CDD:410808 44/77 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.