DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fd59A and Foxq1

DIOPT Version :9

Sequence 1:NP_523814.1 Gene:fd59A / 37631 FlyBaseID:FBgn0004896 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_074049.2 Gene:Foxq1 / 64826 RGDID:621572 Length:400 Species:Rattus norvegicus


Alignment Length:474 Identity:128/474 - (27%)
Similarity:187/474 - (39%) Gaps:145/474 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SVSLSPPLIKSSRGGSSIGNGIGCSASSRTAAADAMSMGCDDSDIEPSSMGGSG----------- 67
            |..:..||  |:.|..|:|:...|:|:|..|...|:.:  :....|.:|.||:.           
  Rat    25 SSDVPSPL--SAAGDDSLGSDGDCAANSPAAGRGAVDL--EGGGGERNSSGGASTQDDPEVTDGS 85

  Fly    68 ---------AAGGNGDGSGSSGGPLV---KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFP 120
                     .||..|.|.|:...|..   ||||||||||.|||..|...:|||:.|.:::|.:||
  Rat    86 RTQASPVGPCAGSVGGGEGARSKPYTRRPKPPYSYIALIAMAIRDSAGGRLTLAEINEYLMGKFP 150

  Fly   121 YYKDKFPAWQNSIRHNLSLNDCFIKVPREPGNP-GKGNFWTLDPLAEDMFDNGSFLRRRKRYKRA 184
            :::..:..|:||:||||||||||:||.|:|..| ||.|:|.|:|.:|..|.:|.|.|||||....
  Rat   151 FFRGSYTGWRNSVRHNLSLNDCFVKVLRDPSRPWGKDNYWMLNPNSEYTFADGVFRRRRKRLSHR 215

  Fly   185 PTMQRFSF------PAVFGTLSPFWIRKPVPLVPVHFNVPNFNGSREFDVVHNPADVFDSALRAD 243
            .|:.....      |...||..|               .|....|   .:..:||       |.:
  Rat   216 TTVSASGLRPEEAPPGPAGTPQP---------------APTAGSS---PIARSPA-------RQE 255

  Fly   244 KKFNFFANAEASFYQGSQSGDKFDRLPFMNRGRGADVLDALPHSSGSGGGVGGGSESSRGSKYKS 308
            :     .::.||.:..|.:.|.....||.:|..|...|           ||            :.
  Rat   256 E-----GSSPASKFSSSFAIDSILSKPFRSRRDGDPAL-----------GV------------QL 292

  Fly   309 PYAFDVATVASAAGIPGHRDYAERL--SAGGGYMDLNVYNDDADTEADAEAEGDDDSCEDKIDVE 371
            |:        |||..|..|.|...|  |:||..:.|..|.                :.|..:...
  Rat   293 PW--------SAAPCPPLRAYPALLPASSGGALLPLCAYG----------------AGEPTLLAS 333

  Fly   372 SGNEQEDSHISDSVDSACTNRLDAPPEALIFEASAEASDSSPRRRFDSE-------PLVLRTSKQ 429
            .|.|.:                  |...|:....:.|:.:.|.|..::.       ||.|.|:.|
  Rat   334 RGAEVQ------------------PAAPLLLAPLSTAAPAKPFRGPETAGAAHLYCPLRLPTALQ 380

  Fly   430 SSAK-------DFRIETLI 441
            ::|.       .:|:|||:
  Rat   381 AAAACGPGPHLSYRVETLL 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd59ANP_523814.1 Forkhead 85..171 CDD:278670 47/86 (55%)
Foxq1NP_074049.2 FH 115..193 CDD:238016 43/77 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.