DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd59A and foxa1

DIOPT Version :9

Sequence 1:NP_523814.1 Gene:fd59A / 37631 FlyBaseID:FBgn0004896 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_989419.1 Gene:foxa1 / 395059 XenbaseID:XB-GENE-487352 Length:428 Species:Xenopus tropicalis


Alignment Length:385 Identity:113/385 - (29%)
Similarity:153/385 - (39%) Gaps:98/385 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 MHTLHDSVSLSPPLIKSSRGGSSIGNGIGCSASSRTAAADAMSMGCDDSDI-------EPSSMGG 65
            |:.:..|.:::......|...|.:|.|:..|..|...|..|.:|....|.:       .||||..
 Frog    47 MNPMSSSSNMTAGSFNMSYANSGLGAGLSPSGMSGMGAGSASAMNGMGSGVSSMGTALSPSSMNA 111

  Fly    66 SGA----------AGGNGDGSGSSGGPL-----------------VKPPYSYIALITMAILQSPH 103
            ..|          :|.|...|..:.||.                 .|||||||:||||||.|:|.
 Frog   112 MSAQQASINSLSYSGMNPGMSPMAYGPSNMNRTRDTKTFRRSYPHAKPPYSYISLITMAIQQAPS 176

  Fly   104 KKLTLSGICDFIMSRFPYYKDKFPAWQNSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDM 168
            |.||||.|..:||..|.||:.....|||||||:||.||||:||.|.|..||||::|||.|.:.:|
 Frog   177 KMLTLSEIYQWIMDLFLYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHPDSGNM 241

  Fly   169 FDNGSFLRRRKRYK--------------------------------RAPTMQRFSFPAVF----- 196
            |:||.:|||:||:|                                :..:....|.|:..     
 Frog   242 FENGCYLRRQKRFKCEKQQGGKGSQDGRKDVSGPSSPLHRVHGKSSQMDSSSSMSNPSSSPQSLE 306

  Fly   197 -----GTLSPFWIRKPVPLVPVHFNVPNFNGSREFDVVHNPADVFDSALRADKKFNFFANAEASF 256
                 |.:.|.....|.||           .|.:....|:.|......|:.|..::|  |...|.
 Frog   307 HNGSNGEMKPQVAAGPSPL-----------SSHQNHSTHSLAHETHIHLKGDPHYSF--NHPFSI 358

  Fly   257 YQGSQSGDKFDRLPFMNRGRGADVLDALPHSSGSGGGVGG---GSESSRGSKYKSPYAFD 313
            .....|.::..:|.|....:      ||...|...||:.|   ||.|..|.....|.|.:
 Frog   359 NNLMSSSEQQHKLDFKAYEQ------ALQQYSSYSGGLPGMPLGSPSMAGRGSIEPSALE 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd59ANP_523814.1 Forkhead 85..171 CDD:278670 53/85 (62%)
foxa1NP_989419.1 Forkhead_N 17..157 CDD:369872 22/109 (20%)
FH 158..246 CDD:214627 54/87 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..337 9/90 (10%)
HNF_C 354..417 CDD:370449 16/65 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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