DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd59A and Foxc2

DIOPT Version :9

Sequence 1:NP_523814.1 Gene:fd59A / 37631 FlyBaseID:FBgn0004896 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001095150.1 Gene:Foxc2 / 171356 RGDID:621703 Length:494 Species:Rattus norvegicus


Alignment Length:461 Identity:136/461 - (29%)
Similarity:189/461 - (40%) Gaps:163/461 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 SRTAAADAMSMGCDDSDIEPSSMGGSGAAGG--------------NGDGSGSSGGP--------- 82
            :|.:.:|..::|......|.:....:|:.||              .|.|.|.|..|         
  Rat     3 ARYSVSDPNALGVVPYLSEQNYYRAAGSYGGMASPMGVYSGHPEQYGAGMGRSYAPYHHQPAAPK 67

  Fly    83 -LVKPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQNSIRHNLSLNDCFIKV 146
             ||||||||||||||||..:|.||:||:||..|||.|||:|::....||||||||||||:||:||
  Rat    68 DLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKV 132

  Fly   147 PREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKRYKR-----------------------APTMQ 188
            ||:...||||::|||||.:.:||:||||||||:|:|:                       |||  
  Rat   133 PRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKDKEERAHLKEPPPASAKGAPT-- 195

  Fly   189 RFSFPAVFGTLSPFWIRKPV--------PLVPVHFNVPNFNGSREFDVVHNPADVFDSALRADKK 245
              ..|...|   |....|.|        |.:||...|...:.              :.||:|..:
  Rat   196 --GTPVADG---PKEAEKKVVVKSEAASPALPVITKVETLSP--------------EGALQASPR 241

  Fly   246 FNFFANAEASFYQGSQSGDKFDRLPFMNRGRGADVLDALP-HSSGSGGGVGGGSESSRGSKYKSP 309
                  :.||...||..|                   :|| |.:.:..|:.|.|..:..:...||
  Rat   242 ------SSASTPAGSPDG-------------------SLPEHHAAAPNGLPGFSVETIMTLRTSP 281

  Fly   310 YAFDVATVASAAGI---PGHRDY------------AERLSAGG--GYM----DLNVYNDDADTEA 353
            ...|::..|:.||:   |....|            |:.|.|.|  ||.    .:::|     |.|
  Rat   282 PGGDLSPAAARAGLVVPPLALPYAAAPPAAYAQPCAQGLEAAGSAGYQCSMRAMSLY-----TGA 341

  Fly   354 DAEAE-----GDDDSCED----------KIDVESGNE----------QEDSHISDSVDSACTNRL 393
            :..|.     ..|::..|          .:::.:|.|          |..||:..          
  Rat   342 ERPAHVCVPPALDEALSDHPSGPGSPLGALNLAAGQEGALGASGHHHQHHSHLHP---------- 396

  Fly   394 DAPPEA 399
            .|||.|
  Rat   397 QAPPPA 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd59ANP_523814.1 Forkhead 85..171 CDD:278670 57/85 (67%)
Foxc2NP_001095150.1 FH_FOXC1 66..158 CDD:410818 59/91 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..213 10/53 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 233..267 12/58 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 380..422 7/33 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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