DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd59A and Foxa2

DIOPT Version :10

Sequence 1:NP_523814.1 Gene:fd59A / 37631 FlyBaseID:FBgn0004896 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001277994.1 Gene:Foxa2 / 15376 MGIID:1347476 Length:465 Species:Mus musculus


Alignment Length:192 Identity:86/192 - (44%)
Similarity:107/192 - (55%) Gaps:34/192 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LSPPLIKSSRGGSSIGNGIGCSASSRTAAADAMSMGCDDSDIEP--SSMGG--SGAAGGNGD-GS 76
            :||.|     .|.|.|.|.....|....||....||   ..:.|  |.:||  :||.||... .:
Mouse    79 MSPSL-----AGMSPGAGAMAGMSGSAGAAGVAGMG---PHLSPSLSPLGGQAAGAMGGLAPYAN 135

  Fly    77 GSSGGPL---------------------VKPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFP 120
            .:|..|:                     .|||||||:||||||.|||:|.||||.|..:||..||
Mouse   136 MNSMSPMYGQAGLSRARDPKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFP 200

  Fly   121 YYKDKFPAWQNSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKRYK 182
            :|:.....|||||||:||.||||:||||.|..||||:||||.|.:.:||:||.:|||:||:|
Mouse   201 FYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFK 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd59ANP_523814.1 FH_FOXD4-like 85..180 CDD:410822 61/94 (65%)
Foxa2NP_001277994.1 Forkhead_N 23..164 CDD:369872 22/92 (24%)
FH_FOXA2 163..264 CDD:410813 64/100 (64%)
PRK07764 <266..>354 CDD:236090
HNF_C 380..454 CDD:430552
Blue background indicates that the domain is not in the aligned region.

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