DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaD and Whrn

DIOPT Version :9

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001008791.1 Gene:Whrn / 73750 MGIID:2682003 Length:918 Species:Mus musculus


Alignment Length:401 Identity:86/401 - (21%)
Similarity:146/401 - (36%) Gaps:107/401 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 DLRRIEVQR-DASKPLGLALAGHKDRQKMACFVAGVDPNGALGSVDIKPGDEIVEVNGNVLKNRC 321
            ::|.:.::| .|.:.||.::.|..: ..:..:|:.|:|........::.||:|:.||...|....
Mouse   138 EVRLVSLRRAKAHEGLGFSIRGGSE-HGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVT 201

  Fly   322 HLNASAVFKNVDGDKLVM--ITSRRKP------------NDEGMCVKPIKKFPTASDETKFIFDQ 372
            |..|....|.  ..|||:  .::.|.|            :.:|....|....|.           
Mouse   202 HAEAVKALKG--SKKLVLSVYSAGRIPGGYVTNHIYTWVDPQGRSTSPPSSLPQ----------- 253

  Fly   373 FPKARTVQVRKEG------------------------FLGIMVIYGKHAEVGSGIFISDLREGSN 413
             |...|::.|::.                        .||:.:..|  ||.|.||:|:.:..||.
Mouse   254 -PHGSTLRQREDDRRSTLHLLQSGDEKKVNLVLGDGRSLGLTIRGG--AEYGLGIYITGVDPGSE 315

  Fly   414 AELAGVKVGDMLLAVNQDVTLESNYDDATGLLKRAEGVVTMILLTLKSEEAIKAEKAAEEKKKEE 478
            ||.:|:||||.:|.||....|...:|:|..|||.:.    .::||:|....:...:...::.|..
Mouse   316 AESSGLKVGDQILEVNGRSFLNILHDEAVKLLKSSR----HLILTVKDVGRLPHARTTVDQTKWI 376

  Fly   479 AKKE----------------EEKPQEPATAEIKPNKKILIELKVEKKPMGVIVCGGKNNHVTTGC 527
            |...                ||...:|.               ..|.|.|..|......:.|...
Mouse   377 ASSRIGESVANSAGFPGDHTEEGTSKPG---------------FYKGPAGSQVTLSSLGNQTRAL 426

  Fly   528 V---ITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFH--TTYEKAVTLTVFRA 587
            :   ..|:..|     .:|..:..::....|..|.|.:|    |..||.  .|:.|...|:..|:
Mouse   427 LDDQARHLLTE-----QERATMMYYLAQYRGGTISVEAM----VMALFELLNTHAKFSLLSEVRS 482

  Fly   588 --DPPELEKFN 596
              .|.:|::|:
Mouse   483 IISPQDLDRFD 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492
PDZ_signaling 259..340 CDD:238492 21/83 (25%)
PDZ_signaling 377..457 CDD:238492 29/103 (28%)
PDZ_signaling 500..584 CDD:238492 18/88 (20%)
PDZ_signaling 597..672 CDD:238492 86/401 (21%)
WhrnNP_001008791.1 HN_L-whirlin_R1_like 38..113 CDD:259822
PDZ_signaling 139..216 CDD:238492 19/79 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..266 6/37 (16%)
PDZ_signaling 278..358 CDD:238492 29/85 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 387..407 3/34 (9%)
HN_L-whirlin_R2_like 420..500 CDD:259823 18/83 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 503..538
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 560..824
PDZ_signaling 827..898 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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