DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and stxbp4

DIOPT Version :10

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001037969.1 Gene:stxbp4 / 733742 XenbaseID:XB-GENE-973737 Length:516 Species:Xenopus tropicalis


Alignment Length:410 Identity:81/410 - (19%)
Similarity:139/410 - (33%) Gaps:141/410 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   379 VQVRKEGFLGIMVIYGKHAEVGSGIFISDLREGSNAELAG-VKVGDMLLAVNQDVTLESNYDDAT 442
            :.|.||..||:.::.|........|:|.|:..|.:....| :|.||.|::||:::.:..:.:.|.
 Frog    15 ITVTKETSLGLSLVGGISRAEEPLIYIKDIIPGGDCHKDGRLKSGDQLVSVNKELLVGVSCEQAK 79

  Fly   443 GLLKRA---EGVVTMILLTLKSEE---------------------AIKAEKAAEEKKKEEAKKEE 483
            .:|.||   :|.|..|......||                     .|.:..||:.....|:.|.:
 Frog    80 CILNRAKLRKGPVWEIAYIRPVEELQNHILPADGCVKGAMDFMPNRISSPSAAKANLSSESIKSQ 144

  Fly   484 EKPQEPATA-----------EIKPNKKILIELKVEKKPMGVIVCGGKNNHVTTGCVITHVYPEGQ 537
            ...:.|.:|           .:.|:    |.:||||..|.:...|              ::|..:
 Frog   145 HAAESPLSAASQTYGEEEQLSLNPS----IRIKVEKLEMALNYLG--------------IHPNEE 191

  Fly   538 VAADKRLKIFDHICDINGTPIHVG-------SMTTLKVHQLFHTTYEKAVTLTVFR--------- 586
               .|||...|...|.||| :..|       .:.||::.:   ..:::.:||:..|         
 Frog   192 ---QKRLMKQDLKIDANGT-VEYGDFVQVARKLFTLQIKE---GDFKQEMTLSEDRDITSLIDSN 249

  Fly   587 ----------ADPP------------ELEKFNVDLMK------KAGKEL---------------- 607
                      :|.|            ||:|....|.|      :..:||                
 Frog   250 ANKDSLHPSVSDDPEQLRRERNEAYAELKKLKERLQKSEKNRSQLSEELENVKQEAKGAIEEARA 314

  Fly   608 ----------------GLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQV 656
                            |:.....|    :..|::.:..|:.::|.:....||.|...|:.....:
 Frog   315 LRNRIHLAEVAQSQASGMETDYEE----VIRLLEAEVAELKAQLLKCSGQTKDNVQDLKRRASVL 375

  Fly   657 CYALFKGANGKVSMEVTRPK 676
            |..|.|....:.:.|||..|
 Frog   376 CCQLRKSEMARKAFEVTTEK 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ1_INAD-like 29..115 CDD:467276
PDZ8_MUPP1-PDZ7_PATJ-PDZ2_INAD-like 259..342 CDD:467160
PDZ3_INAD-like 379..454 CDD:467277 23/78 (29%)
PDZ4_INAD-like 501..585 CDD:467278 21/90 (23%)
PDZ5_INAD-like 596..674 CDD:467279 18/115 (16%)
stxbp4NP_001037969.1 PDZ1_hSTXBP4-PDZ2_GgSTXBP4-like 12..99 CDD:467184 24/83 (29%)
Smc <215..>401 CDD:440809 30/188 (16%)
WW 464..493 CDD:459800
Blue background indicates that the domain is not in the aligned region.

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