DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and Pdzph1

DIOPT Version :9

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_081277.1 Gene:Pdzph1 / 69239 MGIID:1916489 Length:1238 Species:Mus musculus


Alignment Length:569 Identity:111/569 - (19%)
Similarity:197/569 - (34%) Gaps:177/569 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IHMVTLDKTGKKSFGI-C----IVRGEVKDSPNTKTTGIFIKGIVPD---SPAHLCGRLK----- 78
            :..:||...|.|:..: |    .:.||..:|.|:....:..:...|.   ||:|...|..     
Mouse   450 LSFLTLQLLGAKADNMGCRGEETLPGEGHESSNSLLFPVSEQAAKPSPLLSPSHRVSRCSEPVET 514

  Fly    79 VGDRILSLNGKDVRNSTEQAVIDLIKEADFKIE--LEIQTFDKSDEQQAKSD--------PRS-- 131
            .|:.........|....|:....||.:|....:  ..||..::.|.|.....        |:|  
Mouse   515 TGNTFSFSQYIGVEREQEKVHYRLINKASLHNDSSSNIQPLERKDPQSPAVTIASCSILVPKSPL 579

  Fly   132 NGYMQAKNKFNQEQTTNNNASGGQGMGQGQGQ-----------GQGMAGMNRQQS-------MQK 178
            :|.:.:..::||   |.::|:..:..|..:.:           .|.:|..|.::|       |..
Mouse   580 HGNIHSSVEWNQ---TEDHANHAERAGLSRMEVPVMASITNELEQSLATQNYKESTVDSNSPMAI 641

  Fly   179 RNTTFTASMRQK----------------HSNYADEDDEDTRDMTGRI--------------RTEA 213
            ||...:.|..:.                |.|:.|...|:..::..::              .||.
Mouse   642 RNPRESTSYLENVGDDASQALPVVKNMCHRNFEDLTRENQNEICSQMDFLQNSSESTSVGHTTEK 706

  Fly   214 GYEIDRASAGN-----------CKLNK-QEKDRDKEQEDEFGYTMAKINKRY------------- 253
            .:.||:..|.:           |.||. |::..:.::.....|.....|:||             
Mouse   707 LFLIDKTLASDDDSNSNRDHKTCGLNNFQQEPAECQRTTSRVYCEESGNQRYPTEVSCHPVDILL 771

  Fly   254 -----NMMKDLRRIEVQRDASKPLGLALAG---------------------HKDRQKMACFVAG- 291
                 ..:|| :.:|:.........|||.|                     .||.::  |..|| 
Mouse   772 SPQKQKALKD-QNLEINNPRKLSQELALRGGRASDGSQEEAIEQWARRRQQFKDGKR--CSSAGG 833

  Fly   292 --VDPNGALGSVDIKPGDEI----------VEVNGNVLKNRCHLNASA-VFKNVDGDKLVMITSR 343
              |..|...||:   ..|::          :|..|...:|   .:::| ||:..||:        
Mouse   834 SSVISNFTEGSI---TSDDVHSVDFGFRVDIEEKGFYTEN---FHSTAWVFRGDDGN-------- 884

  Fly   344 RKPNDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVRKEGFLGI-MVIYGKHAEVGSGIFISD 407
              |.|...|:.. |..|.|..|           |||::    |.|. ...:|...:....|.:::
Mouse   885 --PEDSPRCLSK-KPRPVAVRE-----------RTVRL----FKGTGDYPWGFRIQFSKPIVVTE 931

  Fly   408 LREGSNAELAGVKVGDMLLAVNQDVTLESNYDDATGLLKRAEGVVTMIL 456
            :...|.||.||:::||::|:||........:.:|..|.|:...::||::
Mouse   932 VDTNSAAEEAGLQIGDVVLSVNGTEVTSVEHAEAVHLAKKGLDILTMVV 980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 20/102 (20%)
PDZ_signaling 259..340 CDD:238492 23/115 (20%)
PDZ_signaling 377..457 CDD:238492 22/81 (27%)
PDZ_signaling 500..584 CDD:238492
PDZ_signaling 597..672 CDD:238492
Pdzph1NP_081277.1 PDZ_signaling 903..981 CDD:238492 23/93 (25%)
PH-like 986..1093 CDD:302622
PH 993..1094 CDD:278594
PH-like 1123..1215 CDD:302622
PH 1125..1216 CDD:278594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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