Protein Alignment inaD and ush1c

DIOPT Version :9

• Sequence 1: NP_001246470.1
• Gene: inaD / 37629
• FlyBaseID: FBgn0001263
• Length: 686
• Species: Drosophila melanogaster
• Sequence 2: XP_009296312.1
• Gene: ush1c / 564412
• ZFINID: ZDB-GENE-060312-41
• Length: 586
• Species: Danio rerio
• Alignment Length: 562
• Identity: 113/562 - (20%)
• Similarity: 196/562 - (34%)
• Gaps: 185/562 - (32%)

  Fly    30 VTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNS 94
            |.||:|..:..|:. |||.::..     :|:||..||.|..|...| |:|||.|:.:||..:.:.
Zfish    88 VRLDRTHPEGLGLS-VRGGLEFG-----SGLFISQIVKDGQAGNVG-LQVGDEIVRINGYSISSC 145

  Fly    95 TEQAVIDLIKEADFKIELEIQTFDKSDEQQAKSDPRSNGYMQAKNKFNQEQTTNNNASGG----- 154
            ..:.||:|||... .:.|:::.......:.:..:|..   .|..::|..|....:|:..|
Zfish   146 IHEEVINLIKTKK-TVSLKVRHVGMIPVKSSSDEPLK---WQFVDQFVSESGEKSNSIAGLASIG 206

  Fly   155 ----------------QGMG----QGQGQGQGM------------------------------AG 169
                            :|||    .|..:..|:                              ..
Zfish   207 GNEIKEKKVFLSLVGTKGMGISISSGPTKKPGIYVSNVKPGSLSAEVGLQVGDQIVEVNGVEFTN 271

  Fly   170 MNRQQSMQ----KRNTTFTASMRQKHSNYADEDDEDTRDMTGRIRTEAGYEIDR--------ASA 222
            ::.|::::    .|:.|.|. :....|.....|:|       |:..||.:|:||        .:.
Zfish   272 LSHQEAVRVLKSSRSLTITV-LTGAGSELFMTDEE-------RLAVEARHELDRQELMHQKKVAL 328

  Fly   223 GNCKLNKQEKDRDKEQEDEFGYTMAKINKRYNMMKDLRRIEVQRDASKPLGLALAGHKDRQKMAC 287
            ...|:.|::::::::::.|.....|:..:||.  |::.|||..............|.|:::|...
Zfish   329 ETNKIVKEQQEKERQRKMEISQKAAEEEERYR--KEMERIEAAEKKHHKEWEDDWGSKEKKKSVS 391

  Fly   288 FVAGVDPNGALGSVDIKPGDEIVEVNGNVLKNRCHLNASAVFKNVDGDKLVMITSRRKPNDEGMC 352
            ..|...|                                                   |....:.
Zfish   392 PAASPSP---------------------------------------------------PPPTRLA 405

  Fly   353 VKPIKKFPTA---SDET-----KFIFDQFPKA------------RTVQVRKEGFLGIMVIYGKHA 397
            ..|..|..||   .:||     |::.|..|.:            |.::::|||.|.:.:..|..:
Zfish   406 PSPKPKTSTADSYEEETGEGFQKYVDDFDPHSMFTAEQIAGRDVRLLRIKKEGKLDLAIEGGIDS 470

  Fly   398 EVGSGIFISDLREGSNAEL-AGVKVGDMLLAVN----QDVTLESNYDDATGLLKRAEGVVTMILL 457
            .:|. |.:|.:.||..|:. .||..||.::|||    .||||             |||..:|...
Zfish   471 PLGK-IVVSSIYEGGAADKHGGVVSGDEIMAVNGKILTDVTL-------------AEGQTSMAQA 521

  Fly   458 TLKSEEAIKAEKAAEEKKKEEAKKEEEKPQEPATAEIKPNKK 499
            .....:.|....|....|       |.:.:.|..|.::|..|
Zfish   522 WNSGGDWIDLVIAVSPPK-------EYEDEVPKAASVRPTAK 556

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
inaD	NP_001246470.1	PDZ_signaling	27..115	CDD:238492	29/84 (35%)
		PDZ_signaling	259..340	CDD:238492	8/80 (10%)
		PDZ_signaling	377..457	CDD:238492	27/84 (32%)
		PDZ_signaling	500..584	CDD:238492	113/562 (20%)
		PDZ_signaling	597..672	CDD:238492
ush1c	XP_009296312.1	harmonin_N	2..80	CDD:259819
		PDZ_signaling	85..165	CDD:238492	29/84 (35%)
		PDZ_signaling	212..292	CDD:238492	9/80 (11%)
		RILP-like	317..>379	CDD:304877	11/63 (17%)
		PDZ_signaling	447..534	CDD:238492	28/100 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3528
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.900