DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and Patj

DIOPT Version :10

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster


Alignment Length:607 Identity:126/607 - (20%)
Similarity:232/607 - (38%) Gaps:138/607 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QFLGKQGTAGV---------FISFG----MHNPFPELIHMVTLDKTGK---------KSFGICIV 45
            :..|:..||..         |:..|    :.:|..:|..::.|.:|.|         ...||.|.
  Fly   269 EIFGESSTASTPQTTTEDDRFVYRGETSMLIDPNIDLEELLALPETEKLQVELKKDANGLGITIA 333

  Fly    46 RGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKI 110
             |.|.:  ..:.:|||:|.:.|.|.|.|.||::|.|||:.::|:.::..:....::|:|::...:
  Fly   334 -GYVCE--KEELSGIFVKSVSPGSAADLSGRIRVNDRIIEVDGQSLQGYSNHQAVELLKKSGQVV 395

  Fly   111 ELEIQ------TFDKSDEQQAKSD--PRSNGYMQAKNKFNQEQTTNNNASGGQGMG-----QGQG 162
            .|.::      .|::..:..|.:|  |.|.....::........|.::|:......     :.:.
  Fly   396 NLRLERYLRGPKFEQLQQAIAANDKLPSSAPGTPSRAPMPTPVATTSSATTTPSRSITRELEEEA 460

  Fly   163 QGQGMAGMNRQQSMQKRNTTFTASMRQKHSNYADEDDEDTRDMTGRIRTEAGYEIDRASAGNC-K 226
            .....|.|....|:....||..:|........|..|..|  ..|..|.||.....|:..|.|. .
  Fly   461 LPAPEAFMTTPPSVTTMTTTTLSSFGAGKQLVAVRDSLD--GSTKIIPTEVVPLADKTEAKNSGV 523

  Fly   227 LNKQEKDRDKEQEDEFGYTMAKINKRYNMM--KDLRRI--EVQRDASKPLGLALAGHKDRQ---- 283
            :.:.:...|.|..|:   ...:|.:::..:  .|:..|  ::::.|...||::|.|..|.:    
  Fly   524 ITRHKYYTDPELSDD---AETEIIRKWQKIVGSDVEVIVAQIKKFAVGGLGISLEGTVDVEGGRE 585

  Fly   284 -KMACFVAGVDPNGALG-SVDIKPGDEIVEVNGNVLKNRCHLNASAVFKNVDGDKLVMITSRRKP 346
             :...::..:.|:|.:| :..::.|||::||||..|....||...|:.|.:..| :.|:..|.:.
  Fly   586 VRPHHYIRSILPDGPVGVNGVLRSGDELLEVNGERLLGMNHLEVVAILKELPLD-VRMVCGRNRN 649

  Fly   347 NDEGMCVKPIKKFPTASDETKFIFDQFPKA-----RTVQVRKEGFLGI----------------- 389
            :         ...|.:.|..|.:.:.|...     |.|:.:.:|.|..                 
  Fly   650 S---------SLLPFSDDTLKKLSNNFENLLPATDRLVKAKSDGSLATAGSVADGDSVAAAAASF 705

  Fly   390 -------------MVIYGKHAEV--------GSGIFISDLRE----------------GSNAELA 417
                         :.::....::        |.|..|.|.::                |..|:|.
  Fly   706 SKLKSRSLEPLTGLAMWSSQPQIIELVKGDRGLGFSILDYQDPLDPNDTLIVIRSLVPGGVAQLD 770

  Fly   418 GVKV-GDMLLAVNQDVTLE-SNYDDATGLLKRAE------GVVTMILLTLKSEEAIKAEKAAEEK 474
            |..: ||.||.|| .:.|| ::.|.|...||.|.      ||...:.:|   :.::||...|...
  Fly   771 GRLIPGDRLLFVN-SINLENASLDQAVQALKGASKGVVRIGVAKPLPMT---DNSLKACSNASTT 831

  Fly   475 KKEEAKKEEEKPQEPATAEIKP 496
            .:|..   :.:|..||...:.|
  Fly   832 SEETL---DAQPSPPALPTVAP 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ1_INAD-like 29..115 CDD:467276 26/94 (28%)
PDZ8_MUPP1-PDZ7_PATJ-PDZ2_INAD-like 259..342 CDD:467160 24/90 (27%)
PDZ3_INAD-like 379..454 CDD:467277 26/136 (19%)
PDZ4_INAD-like 501..585 CDD:467278
PDZ5_INAD-like 596..674 CDD:467279
PatjNP_477342.1 L27 12..70 CDD:470651
PDZ2_MUPP1-like 148..227 CDD:467155
PDZ3_MUPP1-like 315..401 CDD:467253 24/88 (27%)
PDZ4_MUPP1-like 556..646 CDD:467156 24/90 (27%)
PDZ5_MUPP1-like 719..816 CDD:467157 23/97 (24%)
Blue background indicates that the domain is not in the aligned region.

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