DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaD and dysc

DIOPT Version :9

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster


Alignment Length:597 Identity:111/597 - (18%)
Similarity:213/597 - (35%) Gaps:169/597 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 RSNGYMQAKNKFNQEQTT-----NNNASGGQGMGQ-GQGQGQGMAGMNRQQSMQKRNTTFTASMR 188
            |.:.|:.:....:....|     .:.|:.|:.||| ....|.....::.:|.::....|.::|:.
  Fly   177 RGSAYLSSSPASHMAAGTAGTLPTSTAASGRSMGQHASSNGNKKRPISPEQVLRMFGATQSSSVP 241

  Fly   189 QKHSNYADEDDEDTRDMTGRIRTEAGYEIDRASAGNCKLNKQEKDRDKEQEDEFGYTMAKINKRY 253
            ....:|::....| ||.|||          |:.|.:......:..||:|:|.:  .::..|::  
  Fly   242 TSSYHYSNGGTRD-RDRTGR----------RSPASSPPSTTHQIYRDRERERD--RSVPNIHE-- 291

  Fly   254 NMMKDLRRIEVQRD--ASKPLGLALAGHKDRQKMACFVAGVDPNGALGSVDIKPGDEIVEVNGNV 316
               ...|.:.:.||  .....|:.:.|.|| ..:..:::.::.|.......::|||.|:||||..
  Fly   292 ---LTTRTVSMSRDQQIDHGFGICVKGGKD-SGLGVYISRIEENSVAERAGLRPGDTILEVNGTP 352

  Fly   317 LKNRCHLNA-SAVFKNVDGDKLVMITSRRKPNDEGMCVKPIKKFPTASDETKFI----------- 369
            ..:..|..| ....:.:...:.:.:|.|..|....  ..|:..|...|.:..:.           
  Fly   353 FTSINHEEALKRCVQILKSSRQISMTVRAPPTLNS--TAPLHGFGPPSRDPMYASMAPPLHPQNQ 415

  Fly   370 -----------------------------------------FDQFPKARTVQVRKE--GFLGIMV 391
                                                     .::..:.|.|::..|  ..||:|:
  Fly   416 AAAAAAAAAASGAGLPFRQTCSWMDRHGRPASPPMEYGGRRSERRDRIRRVELLIEPGQSLGLMI 480

  Fly   392 IYGKHAEVGSGIFISDLREGSNAELAGVKVGDMLLAVNQDVTLESNYDDATGLLKRAEGVVTMIL 456
            ..|  .|.|.|||::.:.:.|.|:.:|:.:||.:|.||....|:..:|:|.|.||..:.:..:| 
  Fly   481 RGG--VEYGLGIFVTGVDKDSVADRSGLMIGDEILEVNGQSFLDVTHDEAVGQLKYHKRMSLVI- 542

  Fly   457 LTLKSEEAIKAEKAAEEKKKEEAKKEEEKPQEPATAEIKP-----------NKKILIELKVEKKP 510
                                   :...:.|....:.|::|           .:|..|...||:|.
  Fly   543 -----------------------RDVGKVPHSCTSIEMEPWDAYSPTGTRARRKGQIATMVEEKA 584

  Fly   511 MGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTT 575
            ..::                   |....|:     :..:|.:.:...:.:.:...:.:..|  .|
  Fly   585 RSLL-------------------PRHHFAS-----LSYYIAEYSAKAMTIDAFVAVLLEML--DT 623

  Fly   576 YEKAVTLT-----VFRADPP---------ELEKFNVDLMKKAG---KELGLSLSPNEIGCTIADL 623
            |||...:|     ||..|..         |.:.::||..::.|   ::|.::....||   ||  
  Fly   624 YEKHTLVTEIRELVFPEDRTRYDELVYRRERDPYSVDRHRRKGDPARDLPVTADDLEI---IA-- 683

  Fly   624 IQGQYPEIDSKL 635
            ..|:.|..||.|
  Fly   684 ATGRSPSSDSGL 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492
PDZ_signaling 259..340 CDD:238492 18/83 (22%)
PDZ_signaling 377..457 CDD:238492 27/81 (33%)
PDZ_signaling 500..584 CDD:238492 13/88 (15%)
PDZ_signaling 597..672 CDD:238492 13/42 (31%)
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 19/86 (22%)
PDZ_signaling 466..543 CDD:238492 26/102 (25%)
HN_L-whirlin_R2_like 573..653 CDD:259823 17/105 (16%)
PDZ_signaling 886..971 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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