DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaD and Fife

DIOPT Version :9

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001261340.1 Gene:Fife / 38337 FlyBaseID:FBgn0264606 Length:1314 Species:Drosophila melanogaster


Alignment Length:561 Identity:105/561 - (18%)
Similarity:180/561 - (32%) Gaps:179/561 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DKTGK----KSFGICIVRGEVKDSPNTKTTG---IFIKGIVPDSPAHLCGRLKVGDRILSLNGKD 90
            |.|.|    :.||:.:|.|:      |...|   .:|...||...|...| |:.||:||..||..
  Fly   498 DPTDKAHRTRGFGMRVVGGK------TGADGRLFAYIVWTVPGGAAEKNG-LQQGDKILEWNGMS 555

  Fly    91 -VRNSTEQA---------VIDLIKE--ADFKIELEIQTFDKSDEQQAKSDPRSNGYMQAKNKFNQ 143
             :..|.|:.         |::|:.|  .||::   ...||                         
  Fly   556 LIDRSFEEVCSIMDRTGDVVELLVEHATDFRM---CDLFD------------------------- 592

  Fly   144 EQTTNNNASGGQGMGQGQGQGQGMAGMNRQQSMQKRNTTFTASMRQKHSNYADEDDEDTRDMTGR 208
            |.....||.|..|   .:..|.|..|:......:.......||..::......|.....:.:|||
  Fly   593 ENLPPGNAGGQSG---PRRSGDGPVGLGLIAEPETTTDKSPASPTRRKLPKTPEQIAREKLVTGR 654

  Fly   209 IRTEAGYEIDRAS------AGNCKLNKQEKDRDKEQEDEFGYTMAKINKRYNMMK--------DL 259
            ::.:..|..:|:.      ||:          |....|| .|....:.:.|..::        .:
  Fly   655 VQIQVWYHAERSELVVSLMAGD----------DLAPRDE-AYGHGNLPEAYAKVRILPKCGDGSV 708

  Fly   260 RRIEVQRDASKPLGLALA--GHKDRQKMACFVAGVDPNGALGSVDIKPGDEIVEVNGNVLKNRCH 322
            ::.||.|....|:..|..  ||.....:           .:..:||:..| :|....::....|.
  Fly   709 QQTEVSRPTQNPIWNATLTFGHVKADTL-----------MVRYIDIQLWD-LVPHTESIFLGECS 761

  Fly   323 LNASAVFKNVDGDKLVMITSRRKPNDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVRKEGFL 387
            :.....|.:   |:.:..   |..:.:|:....|.|.|:.|          |:            
  Fly   762 IELQQAFLD---DQAIWC---RLEDTKGLRGISISKSPSVS----------PR------------ 798

  Fly   388 GIMVIYGKHAEVGSGIFISDLREGSNAELAGVKVGDMLLAVNQDVTLE-SNYD------DATGLL 445
                                   ||.|..||...||:...:.:|..:: ||.|      |.|.||
  Fly   799 -----------------------GSIAAGAGAPSGDVTRLLRRDYNMQRSNSDDVDSIGDGTSLL 840

  Fly   446 --------------KRAEGV-VTMILLTLKSEEAIKAEKAAEEKKKEEAKKEEEKPQEPATAEIK 495
                          .::|.: |.:..|......::...:.:..:..|:.:.||:....|.|:.:.
  Fly   841 HPDHAWIAGSRRGSSQSETMEVEVYQLGKDFSRSLPGSRRSSFQDAEKNRLEEDAMATPPTSYLV 905

  Fly   496 PNKK----------ILIELKVEKKPMGVIVCGGKNNHVTTG 526
            ..::          ||..||..:..:|..:..|...|...|
  Fly   906 GRRRSSVARRDPDEILKSLKAVRGELGRTMSLGTEQHKRMG 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 28/100 (28%)
PDZ_signaling 259..340 CDD:238492 14/82 (17%)
PDZ_signaling 377..457 CDD:238492 17/101 (17%)
PDZ_signaling 500..584 CDD:238492 8/27 (30%)
PDZ_signaling 597..672 CDD:238492
FifeNP_001261340.1 FYVE_BSN_PCLO 130..187 CDD:277290
PDZ_signaling 491..580 CDD:238492 25/88 (28%)
DegQ <526..577 CDD:223343 15/51 (29%)
C2A_RIM1alpha 651..779 CDD:175997 27/156 (17%)
C2 1163..1304 CDD:301316
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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