DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and pdzk1

DIOPT Version :9

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001122142.2 Gene:pdzk1 / 337325 ZFINID:ZDB-GENE-031222-1 Length:553 Species:Danio rerio


Alignment Length:583 Identity:114/583 - (19%)
Similarity:200/583 - (34%) Gaps:172/583 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 MHNPFPELIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRI 83
            |..|.|.:|.:...:..| ..|.:.:..||         .|..|:.:.....|.|.| ||.||||
Zfish     1 MAGPKPRIISLTKRESQG-YGFYLRVEHGE---------EGHLIRALEMGGAAELAG-LKDGDRI 54

  Fly    84 LSLNGKDVRNSTEQAVIDLIKEADFKIELEIQTFDKSDEQQAKSDPRSNGYMQAKNKFNQEQTTN 148
            |.:|...|.|.....|.||::.:...:.|.:.              ....|..||       ..|
Zfish    55 LRVNNTFVDNLEHTQVADLVRNSGMSVTLHVL--------------GEEAYKTAK-------ANN 98

  Fly   149 NNASGGQGM-GQGQGQGQGM---AGMNRQQSMQKRNTTFTASMRQ---KHSNYADEDDEDTRDMT 206
            .|.:..|.: ||.|....|:   |...:...:||.::.|..|::.   .|..:..:      .::
Zfish    99 VNLADLQSLPGQSQPTMNGVSTPAAKAKLCYLQKSSSGFGFSLKSTKGAHGIFMVD------VVS 157

  Fly   207 GRIRTEAGYEI-DRASAGNCKLN-------------KQEKDR------DKEQEDEFGYTMAKINK 251
            |.:..:||.:: ||....|.: |             |...||      |:|.:..|        |
Zfish   158 GGVADQAGVKLGDRLVEINSE-NVEHLVHDQIVQKVKAASDRLMLLLVDEEADRYF--------K 213

  Fly   252 RYNMMKDLRRIEVQRDASKPL---------GLALAGHKDRQKMACFVAGVDPNGALGSVDIKPGD 307
            ..|:...:....|:....||.         |......:|.::....:..:|.........:|..|
Zfish   214 SKNIQPGVSHATVKHLPHKPRIADMIKRADGYGFMLKEDPKRKGHCIGEIDKGSPAERAGMKDMD 278

  Fly   308 EIVEVNGNVLKNRCHLNASAVFKNVDGDK---LVMITSRRK-----------------------P 346
            .:..|||..::|..|  ...|.|...|:|   ||:.....|                       |
Zfish   279 RLAAVNGEDIENCKH--EQVVEKICQGNKCCLLVLDAETDKIYKLGGVSPLLYWEEMRGSLPGYP 341

  Fly   347 NDEGMCVKPI-------------------------KKFPTASDETKFIFDQFPKARTVQVRKEGF 386
            ::|.:.:..:                         ...|.|::...  .|..||...::....||
Zfish   342 DNEAVAIPAVAAAVPAAVVAATPAPAATPAPAATPTPVPAAAEPAD--VDHKPKLCRLERTSAGF 404

  Fly   387 ----LGIMVIYGKHAEVGSGIFISDLREGSNAELAGVKVGDMLLAVNQDVTLE-SNYDDATGLLK 446
                .||..:.|:|        |.::.:|..|:.||:...|:::.|: .|.:| |.:::...|::
Zfish   405 GFHLNGIQGVPGQH--------IQEVVKGGAADRAGLVDDDVVVEVD-GVNVEMSTHEEVVNLIR 460

  Fly   447 RAEGVVTMILLTLKSEEAIKA------------EKAAEEKK--------KEEAKKEEEKPQEP 489
            .:...:.:::...|:.|.:||            |.||:...        :::.:|:.|||..|
Zfish   461 NSGDTLVLLVADRKAYEHLKAKGIPITPQLLNKEPAADVPAPAYTQVDGRKDTEKDIEKPATP 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 24/87 (28%)
PDZ_signaling 259..340 CDD:238492 19/92 (21%)
PDZ_signaling 377..457 CDD:238492 17/84 (20%)
PDZ_signaling 500..584 CDD:238492
PDZ_signaling 597..672 CDD:238492
pdzk1NP_001122142.2 PDZ_signaling 6..86 CDD:238492 25/90 (28%)
PDZ_signaling 126..204 CDD:238492 15/84 (18%)
PDZ 232..311 CDD:214570 17/80 (21%)
PDZ_signaling 392..471 CDD:238492 19/87 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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